RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 J3KR12 359 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
CLK3-213ENST00000563842 SLC1A1P43005 524 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 MAGEA1P43355 309 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 CSNK1DP48730 415 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 SUOXP51687 545 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 TAS2R38P59533 333 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 PPP2CBP62714 309 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 PPP2CAP67775 309 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 NSUN2Q08J23 767 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLK3-213ENST00000563842 OVGP1Q12889 678 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 STAT4Q14765 748 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 SUZ12Q15022 739 aaKnown RBP13.58□□□□□ -0.24
CLK3-213ENST00000563842 TCEAL1Q15170 157 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 CYTH1Q15438 398 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 ATXN7L2Q5T6C5 722 aaPredicted RBP13.58□□□□□ -0.24
CLK3-213ENST00000563842 TXNRD3NBQ6F5E7 133 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 NAPEPLDQ6IQ20 393 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 KIAA1161Q6NSJ0 714 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 IQCHQ86VS3 1027 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 HORMAD1Q86X24 394 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 TMTC1Q8IUR5 882 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 MFSD2AQ8NA29 543 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 OR6K2Q8NGY2 324 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 FAM174AQ8TBP5 190 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 TSC1Q92574 1164 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 SLC6A18Q96N87 628 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
CLK3-213ENST00000563842 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 ACACBO00763 2458 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 NCOR2Q9Y618 2525 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 A0A1W2PQU0 124 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 TMEM110-MUSTN1A8MSY1 372 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 NEMP1O14524 444 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 TSPAN6O43657 245 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 KCNK5O95279 499 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 UGT2B4P06133 528 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 CEACAM1P13688 526 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 KCNA4P22459 653 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 XPAP23025 273 aaPredicted RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 MAT2AP31153 395 aaKnown RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 GJC1P36383 396 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 HSPA9P38646 679 aaKnown RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 RPS21P63220 83 aaKnown RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 KIF19Q2TAC6 998 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 HLA-BQ31612 363 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 ODF2Q5BJF6 829 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 CFAP58Q5T655 872 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 PARS2Q7L3T8 475 aaKnown RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 ATPAF2Q8N5M1 289 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 NPWQ8N729 165 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
CLK3-213ENST00000563842 TUBGCP5Q96RT8 1024 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 EBF2Q9HAK2 575 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 HAUS2Q9NVX0 235 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 SEPT3Q9UH03 358 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 FADS3Q9Y5Q0 445 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 LRRK1Q38SD2 2015 aa13.57□□□□□ -0.24
CLK3-213ENST00000563842 MED19A0JLT2 244 aaPredicted RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 YKT6O15498 198 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 GJB3O75712 270 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 LCA5LO95447 670 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 AKT2P31751 481 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 GKP32189 559 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 CTSKP43235 329 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 NOP2P46087 812 aaKnown RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 ARSEP51690 589 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 DPYSL3Q14195 570 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 ZNF235Q14590 738 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 SRLQ86TD4 932 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 TTC7BQ86TV6 843 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 VSIG1Q86XK7 387 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 OXR1Q8N573 874 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
CLK3-213ENST00000563842 CNTNAP3BQ96NU0 1288 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 CNTNAP3Q9BZ76 1288 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 ATP13A3Q9H7F0 1226 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 TM7SF3Q9NS93 570 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 IMPACTQ9P2X3 320 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 PCDHGB2Q9Y5G2 931 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 SNX11Q9Y5W9 270 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
CLK3-213ENST00000563842 A0A1W2PR77 199 aa13.55□□□□□ -0.24
CLK3-213ENST00000563842 ZNF487B1APH4 448 aa13.55□□□□□ -0.24
CLK3-213ENST00000563842 TLR4O00206 839 aa13.55□□□□□ -0.24
CLK3-213ENST00000563842 RNF103O00237 685 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms