RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 KIAA1522Q9P206 1035 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-208ENST00000563220 ZMYM5Q9UJ78 669 aa18.26■□□□□ 0.51
COMMD4-208ENST00000563220 INTS6Q9UL03 887 aaKnown RBP18.26■□□□□ 0.51
COMMD4-208ENST00000563220 IQANK1A0A1B0GTG1 560 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 SERPINF2P08697 491 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 TCF3P15923 654 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 CDK18Q07002 472 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 FRG1Q14331 258 aaKnown RBP18.25■□□□□ 0.51
COMMD4-208ENST00000563220 INO80DQ53TQ3 878 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-208ENST00000563220 SIRPB2Q5JXA9 342 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 MARK2Q7KZI7 788 aaKnown RBP18.25■□□□□ 0.51
COMMD4-208ENST00000563220 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 SFXN1Q9H9B4 322 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 TCAF1Q9Y4C2 921 aa18.25■□□□□ 0.51
COMMD4-208ENST00000563220 HMX2A2RU54 273 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 K7ERQ8 282 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 INSIG1O15503 277 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SPAG7O75391 227 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 PENKP01210 267 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SERPINH1P50454 418 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ADGRG2Q8IZP9 1017 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 CDKL2Q92772 493 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 IRF7Q92985 503 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 MRPL38Q96DV4 380 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 CDCA3Q99618 268 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 APOL5Q9BWW9 433 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SENP1Q9P0U3 644 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 FCF1Q9Y324 198 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 PSAT1Q9Y617 370 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 WNT6Q9Y6F9 365 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ATG2AQ2TAZ0 1938 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 GLP2RO95838 553 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 KRT4P19013 534 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ADRA1DP25100 572 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 HLA-FP30511 346 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 PLEKHG6Q3KR16 790 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ASTLQ6HA08 431 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ESRP1Q6NXG1 681 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 ZNF449Q6P9G9 518 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 RASSF3Q86WH2 238 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 PPHLN1Q8NEY8 458 aaKnown RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 FEM1CQ96JP0 617 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SERAC1Q96JX3 654 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 KLF6Q99612 283 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 C2orf49Q9BVC5 232 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SCUBE2Q9NQ36 999 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SPHK2Q9NRA0 654 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 HAUS2Q9NVX0 235 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 TBC1D14Q9P2M4 693 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 LHX3Q9UBR4 397 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 SLC2A6Q9UGQ3 507 aa18.24■□□□□ 0.51
COMMD4-208ENST00000563220 TRIM49D1C9J1S8 452 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 NEDD8-MDP1E9PL57 170 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 EPOP01588 193 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 SNRPAP09012 282 aaKnown RBP18.23■□□□□ 0.51
COMMD4-208ENST00000563220 LSP1P33241 339 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 BMPR2Q13873 1038 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 LY6G5CQ5SRR4 150 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 PACS1Q6VY07 963 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 SH2D5Q6ZV89 423 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 ANKRD42Q8N9B4 389 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 ATXN2LQ8WWM7 1075 aaKnown RBP18.23■□□□□ 0.51
COMMD4-208ENST00000563220 RSPRY1Q96DX4 576 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 IFT43Q96FT9 208 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 NUDCD1Q96RS6 583 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 TRIB3Q96RU7 358 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 SMC6Q96SB8 1091 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 AGAP2Q99490 1192 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 MRM3Q9HC36 420 aaKnown RBP18.23■□□□□ 0.51
COMMD4-208ENST00000563220 C20orf96Q9NUD7 363 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-208ENST00000563220 ABCB8Q9NUT2 735 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 PRKAG3Q9UGI9 489 aa18.23■□□□□ 0.51
COMMD4-208ENST00000563220 GOLGA8TH3BQL2 631 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 GOLGA8RI6L899 631 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 LINC01565O15544 149 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 SMAD6O43541 496 aaKnown RBP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 MT-ND3P03897 115 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 PLK1P53350 603 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 NSUN2Q08J23 767 aaKnown RBP eCLIP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 SLC14A2Q15849 920 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 HSP90AA5PQ58FG0 334 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 TEDDM1Q5T9Z0 273 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 KCNMB4Q86W47 210 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 CELF5Q8N6W0 485 aaKnown RBP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 PTCD2Q8WV60 388 aaKnown RBP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 ACDQ96AP0 544 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 CENPTQ96BT3 561 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 TIFAQ96CG3 184 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 TREX1Q9NSU2 369 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 INTS9Q9NV88 658 aaKnown RBP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 ZFATQ9P243 1243 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 CHKBQ9Y259 395 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 HELZP42694 1942 aaKnown RBP18.22■□□□□ 0.51
COMMD4-208ENST00000563220 TYROBPO43914 113 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 KRT37O76014 449 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 PRLP01236 227 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 F7P08709 466 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms