RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PSMC3IPQ9P2W1 217 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 UXTQ9UBK9 157 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 RSPH14Q9UHP6 348 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF180Q9UJW8 692 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TBC1D30Q9Y2I9 924 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 MYO9BQ13459 2157 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ZCWPW2A0A1B0GU75 182 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 A0A1W2PPC1 479 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TMEM120BA0PK00 339 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 F5H5T6 163 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MEN1O00255 615 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MUSKO15146 869 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PRPF4O43172 522 aaKnown RBP eCLIP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PSMD3O43242 534 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 RAMP2O60895 175 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 USP12O75317 370 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CD160O95971 181 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MT-CYBP00156 380 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CPP00450 1065 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 C8AP07357 584 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CHN1P15882 459 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PGAM1P18669 254 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ELF1P32519 619 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 STX2P32856 288 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 GPC1P35052 558 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CTNNB1P35222 781 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 IRS1P35568 1242 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CCR2P41597 374 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 NPY2RP49146 381 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SLC11A2P49281 568 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 HARS2P49590 506 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CDH4P55283 916 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SESN2P58004 480 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 RPS24P62847 133 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SARNPP82979 210 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 DAB2P98082 770 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 UBE3AQ05086 875 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SRSF11Q05519 484 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SLC18A2Q05940 514 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 IL10RBQ08334 325 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 DMTNQ08495 405 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SLC10A7Q0GE19 358 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 NR1H3Q13133 447 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MYO7AQ13402 2215 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CRYMQ14894 314 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TMED2Q15363 201 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MYLKQ15746 1914 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PABPC1LQ4VXU2 614 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CERCAMQ5T4B2 595 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ADGRF1Q5T601 910 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TXNDC8Q6A555 127 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 RANBP10Q6VN20 620 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MARK2Q7KZI7 788 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 Q7L0L9 218 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CHST9Q7L1S5 443 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 RTL10Q7L3V2 364 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ITIH5Q86UX2 942 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CCNJLQ8IV13 435 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 DENND1CQ8IV53 801 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CCDC117Q8IWD4 279 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 UNC5BQ8IZJ1 945 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 CFAP52Q8N1V2 620 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ARL14EPQ8N8R7 260 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 GSDMBQ8TAX9 411 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 POF1BQ8WVV4 589 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TTC17Q96AE7 1141 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ALG14Q96F25 216 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF317Q96PQ6 595 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ARPC5LQ9BPX5 153 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 C17orf80Q9BSJ5 609 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 NAT9Q9BTE0 207 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 KIFC1Q9BW19 673 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ACE2Q9BYF1 805 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 EPN3Q9H201 632 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 MAGEH1Q9H213 219 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PRO3102Q9H379 93 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 LRRC40Q9H9A6 602 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 KIF9Q9HAQ2 790 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SLC28A3Q9HAS3 691 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ARNT2Q9HBZ2 717 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 SSU72Q9NP77 194 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 PIH1D1Q9NWS0 290 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 DNMT3BQ9UBC3 853 aaKnown RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 TBK1Q9UHD2 729 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 OR51B4Q9Y5P0 310 aa6.63□□□□□ -1.35
CAPN3-210ENST00000561817 ZFP37Q9Y6Q3 630 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-210ENST00000561817 HELZP42694 1942 aaKnown RBP6.62□□□□□ -1.35
CAPN3-210ENST00000561817 A0A0D9SEW6 157 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 FAM237BA0A1B0GVD1 139 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 ILVBLA1L0T0 632 aa6.62□□□□□ -1.35
CAPN3-210ENST00000561817 GRM6O15303 877 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms