RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	VPS16	Q9H269	839 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	CHODL	Q9H9P2	273 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	SAP30L	Q9HAJ7	183 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	SMC4	Q9NTJ3	1288 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	MRGBP	Q9NV56	204 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	HOXC10	Q9NYD6	342 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	RRN3	Q9NYV6	651 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	CPSF2	Q9P2I0	782 aa	Known RBP	4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	POLL	Q9UGP5	575 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	GTF3C4	Q9UKN8	822 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	TMEM98	Q9Y2Y6	226 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	ZNF609	O15014	1411 aa		4.38	□□□□□ -1.71
LRRC28-222	ENST00000561431	SCN9A	Q15858	1988 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SYNDIG1L	A6NDD5	238 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	UBE2Q2L	H0YL09	131 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	INO80B-WBP1	J3KQ70	363 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	EYA2	O00167	538 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CLIC1	O00299	241 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TIPRL	O75663	272 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	JTB	O76095	146 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	GRK5	P34947	590 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CLNS1A	P54105	237 aa	Known RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CACNA2D1	P54289	1103 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	PNLIPRP1	P54315	467 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TPD52	P55327	224 aa	Predicted RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	GPC5	P78333	572 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	RAE1	P78406	368 aa	Known RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	COL10A1	Q03692	680 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CXCL9	Q07325	125 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	PDCL	Q13371	301 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	DNASE1L3	Q13609	305 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SLMAP	Q14BN4	828 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	MFSD13A	Q14CX5	517 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	PPP2R5B	Q15173	497 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CNGA3	Q16281	694 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBRG1	Q3YBR2	411 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TMEM63B	Q5T3F8	832 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	ITPRIPL1	Q6GPH6	555 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	WDR93	Q6P2C0	686 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	C16orf87	Q6PH81	154 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	UNC5D	Q6UXZ4	953 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	DCDC5	Q6ZRR9	648 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SYT13	Q7L8C5	426 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	IQCF2	Q8IXL9	164 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	CEP57L1	Q8IYX8	460 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TMEM57	Q8N5G2	664 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	MSANTD4	Q8NCY6	345 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	OR52L2P	Q8NGH6	319 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	MAFA	Q8NHW3	353 aa	Predicted RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D16	Q8TBP0	767 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	THAP4	Q8WY91	577 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	KAZALD1	Q96I82	304 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	UROC1	Q96N76	676 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	FYTTD1	Q96QD9	318 aa	Known RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SEC62	Q99442	399 aa	Known RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	MACROD1	Q9BQ69	325 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	PYM1	Q9BRP8	204 aa	Known RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	MECR	Q9BV79	373 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SLC26A6	Q9BXS9	759 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	VPS45	Q9NRW7	570 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SUN2	Q9UH99	717 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	KCND3	Q9UK17	655 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	SLC12A4	Q9UP95	1085 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	ENTPD2	Q9Y5L3	495 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	WNT6	Q9Y6F9	365 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	UTY	O14607	1347 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	PASK	Q96RG2	1323 aa		4.37	□□□□□ -1.71
LRRC28-222	ENST00000561431	THSD7B	Q9C0I4	1608 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A18P	A6NE21	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A16P	A6NEW6	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A9P	A6NNJ1	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A5P	A8MXJ8	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431		M0QYT0	321 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	GRM8	O00222	908 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	ZNF213	O14771	459 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	MGST3	O14880	152 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	PRAMEF2	O60811	474 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	DKC1	O60832	514 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	UFL1	O94874	794 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	MT-CO3	P00414	261 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	CCDC175	P0C221	793 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A15P	P0C7V4	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM90A14P	P0C7W9	464 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	PEPD	P12955	493 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	ATP6V1B1	P15313	513 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	DES	P17661	470 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	KRT4	P19013	534 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	MATN1	P21941	496 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	SLC8A1	P32418	973 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	ELF1	P32519	619 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	HPD	P32754	393 aa	Predicted RBP	4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	EPHX2	P34913	555 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	EPS15	P42566	896 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	PCP4	P48539	62 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	VPS41	P49754	854 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	CSE1L	P55060	971 aa	Known RBP	4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	SOX10	P56693	466 aa		4.36	□□□□□ -1.71
LRRC28-222	ENST00000561431	ACTR2	P61160	394 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms