RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 VAV2P52735 878 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 SLC10A7Q0GE19 358 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 PAFAH1B3Q15102 231 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 DAAM2Q86T65 1068 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 OR2I1PQ8NGU4 316 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 RNF157Q96PX1 679 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 LACRTQ9GZZ8 138 aa20.18■□□□□ 0.82
TSPAN3-210ENST00000561277 C3orf70A6NLC5 250 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 C4orf47A7E2U8 309 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ARHGAP33O14559 1287 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 RNGTTO60942 597 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PCDH8O95206 1070 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 CSNK1EP49674 416 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 AFF3P51826 1226 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GSDMDP57764 484 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GBE1Q04446 702 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GRIK2Q13002 908 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ZNF235Q14590 738 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 LRRC73Q5JTD7 316 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 C11orf63Q6NUN7 778 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 TPCN2Q8NHX9 752 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ZNF599Q96NL3 588 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 AASDHPPTQ9NRN7 309 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 DDX56Q9NY93 547 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 SEPT3Q9UH03 358 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PCDH15Q96QU1 1955 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 A0A1W2PQU0 124 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 C10orf142B7Z368 130 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 CDX4O14627 284 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 MUSKO15146 869 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 LATO43561 262 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PSTPIP1O43586 416 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GJB3O75712 270 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PEX11BO96011 259 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 SYPP08247 313 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 SDHBP21912 280 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GARSP41250 739 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ABL2P42684 1182 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 LIMK1P53667 647 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 GALNT2Q10471 571 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ADAT2Q7Z6V5 191 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 TRIM69Q86WT6 500 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 NSMCE1Q8WV22 266 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 KLK6Q92876 244 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 SERAC1Q96JX3 654 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 PSKH2Q96QS6 385 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 MAK16Q9BXY0 300 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 DLL3Q9NYJ7 618 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 ITM2BQ9Y287 266 aa20.17■□□□□ 0.82
TSPAN3-210ENST00000561277 SHROOM3Q8TF72 1996 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 A0A1B0GVT2 93 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 SLC30A4O14863 429 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 SCNN1BP51168 640 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 TEAD4Q15561 434 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 UAP1L1Q3KQV9 507 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 RFX6Q8HWS3 928 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 MINDY1Q8N5J2 469 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 LRRN4Q8WUT4 740 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 TPX2Q9ULW0 747 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 FADS3Q9Y5Q0 445 aa20.16■□□□□ 0.82
TSPAN3-210ENST00000561277 NEMP1O14524 444 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 PRLRP16471 622 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 MARCKSL1P49006 195 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 DYNLT1P63172 113 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 RACK1P63244 317 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 CFAP58Q5T655 872 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 SEL1L3Q68CR1 1132 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 MFSD7Q6UXD7 560 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 SRLQ86TD4 932 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 TTC7BQ86TV6 843 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 HORMAD1Q86X24 394 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 BBS5Q8N3I7 341 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 PLD5Q8N7P1 536 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 TRIM10Q9UDY6 481 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 GGT7Q9UJ14 662 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 HEY1Q9Y5J3 304 aa20.15■□□□□ 0.82
TSPAN3-210ENST00000561277 CACNA1EQ15878 2313 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 A0A0U1RQJ8 604 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 MACROD2A1Z1Q3 448 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 TTC24A2A3L6 582 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 BTNL10A8MVZ5 291 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 ZNF487B1APH4 448 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 APOL1O14791 398 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 WNT9AO14904 365 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 SLC31A1O15431 190 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 PJA2O43164 708 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 MMP13P45452 471 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 GRIA4P48058 902 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 RENBPP51606 427 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 SLC10A2Q12908 348 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 PUM1Q14671 1186 aaKnown RBP eCLIP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 GRM3Q14832 879 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 LLGL1Q15334 1064 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 SETMARQ53H47 684 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 MARC1Q5VT66 337 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 NEK5Q6P3R8 708 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms