RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SEMA3CQ99985 751 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 FSD1LQ9BXM9 530 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 NUSAP1Q9BXS6 441 aaKnown RBP10.85□□□□□ -0.67
TPM1-229ENST00000561242 CPEB1Q9BZB8 566 aaKnown RBP10.85□□□□□ -0.67
TPM1-229ENST00000561242 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
TPM1-229ENST00000561242 NEUROG2Q9H2A3 272 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 MTG2Q9H4K7 406 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 PREBQ9HCU5 417 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 POLR3BQ9NW08 1133 aaPredicted RBP10.85□□□□□ -0.67
TPM1-229ENST00000561242 DTLQ9NZJ0 730 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 RSPH14Q9UHP6 348 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 PPM1HQ9ULR3 514 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 AAR2Q9Y312 384 aaKnown RBP10.85□□□□□ -0.67
TPM1-229ENST00000561242 DOCK6Q96HP0 2047 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 DOCK8Q8NF50 2099 aa10.85□□□□□ -0.67
TPM1-229ENST00000561242 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 KCNK1O00180 336 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 KHNYNO15037 678 aaKnown RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 KCNN4O15554 427 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 TSPAN6O43657 245 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 ANXA9O76027 345 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 SYPP08247 313 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 VAV1P15498 845 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 ITGB7P26010 798 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 AKT2P31751 481 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 PTPN7P35236 360 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 OTUD4Q01804 1114 aaKnown RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 PPIDQ08752 370 aaKnown RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 SLC10A7Q0GE19 358 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 LPAL2Q16609 132 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 SETMARQ53H47 684 aaPredicted RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 HS1BP3Q53T59 392 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 AFMIDQ63HM1 303 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 NPNTQ6UXI9 565 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 ARMCX6Q7L4S7 300 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 CPNE8Q86YQ8 564 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 SLC35F6Q8N357 371 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 DEFB119Q8N690 84 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 NPWQ8N729 165 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 PQLC3Q8N755 202 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 NETO2Q8NC67 525 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 TSEN2Q8NCE0 465 aaKnown RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 PRSS33Q8NF86 280 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 CCHCR1Q8TD31 782 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 FATE1Q969F0 183 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 FAM129BQ96TA1 746 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 LGMNQ99538 433 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 NAPGQ99747 312 aaPredicted RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 HDAC8Q9BY41 377 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 SLC6A17Q9H1V8 727 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 AASDHPPTQ9NRN7 309 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 KCTD5Q9NXV2 234 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
TPM1-229ENST00000561242 MFHAS1Q9Y4C4 1052 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM1-229ENST00000561242 MYO10Q9HD67 2058 aa10.84□□□□□ -0.67
TPM1-229ENST00000561242 C3orf70A6NLC5 250 aaPredicted RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 C16orf96A6NNT2 1141 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 HRO43593 1189 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 SOCS5O75159 536 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 CPP00450 1065 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 IFNB1P01574 187 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 FGGP02679 453 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 CFIP05156 583 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 RETP07949 1114 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 PEX5P50542 639 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 COPAP53621 1224 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 GEMP55040 296 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 RPS21P63220 83 aaKnown RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 DMWDQ09019 674 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 P3H1Q32P28 736 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 TEX44Q53QW1 395 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 KIAA0895LQ68EN5 471 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 C4orf22Q6V702 233 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 SLC13A5Q86YT5 568 aaPredicted RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 CHST14Q8NCH0 376 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 ACTL9Q8TC94 416 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 GRK7Q8WTQ7 553 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 RUBCNQ92622 972 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 P2RY11Q96G91 374 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 HSPA12BQ96MM6 686 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 RUNDC3BQ96NL0 473 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 NOL6Q9H6R4 1146 aaKnown RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 WSB2Q9NYS7 404 aaPredicted RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
TPM1-229ENST00000561242 PHTF1Q9UMS5 762 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 ZKSCAN5Q9Y2L8 839 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 PCDHGA5Q9Y5G8 931 aa10.83□□□□□ -0.68
TPM1-229ENST00000561242 IGHV1OR15-9A0A0B4J2B8 117 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 PGRMC1O00264 195 aaKnown RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 ENC1O14682 589 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 TM7SF2O76062 418 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms