RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NKX2-2O95096 273 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 AKR7A3O95154 331 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 KCNK5O95279 499 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 OR2C1O95371 312 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 APBB3O95704 486 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IL18BPO95998 194 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GBAP04062 536 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HIST1H2ABP04908 130 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SERPING1P05155 500 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 F13BP05160 661 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TUBBP07437 444 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CELA2BP08218 269 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 CYP21A2P08686 494 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SBK2P0C263 348 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HNRNPCL4P0DMR1 293 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PCNAP12004 261 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PEPDP12955 493 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PKMP14618 531 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 MYL6BP14649 208 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PFKFB1P16118 471 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IL7RP16871 459 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ZNF182P17025 639 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 GNAT2P19087 354 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ITIH1P19827 911 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NR1D1P20393 614 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HIST1H2ADP20671 130 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 DRD4P21917 467 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FDXRP22570 491 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IL4RP24394 825 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PSMA5P28066 241 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PPIFP30405 207 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 HOXA13P31271 388 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC8A1P32418 973 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RDXP35241 583 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 IL15P40933 162 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ETV4P43268 484 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MAGEA4P43358 317 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CAMLGP49069 296 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NDUFV1P49821 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MXI1P50539 228 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PTTG1IPP53801 180 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PNLIPRP2P54317 469 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 EPHB4P54760 987 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MTTPP55157 894 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ERVFC1P60507 584 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SUMO2P61956 95 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 TUBB4BP68371 445 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ATP2C1P98194 919 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 TAP1Q03518 808 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FPGSQ05932 587 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PPATQ06203 517 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GABPB1Q06547 395 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 C17orf67Q0P5P2 114 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 DUSP8Q13202 625 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SMAD4Q13485 552 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 OLIG2Q13516 323 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GRAPQ13588 217 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 BMPR2Q13873 1038 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IL13RA2Q14627 380 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 DRAP1Q14919 205 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 EIF4HQ15056 248 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ACOX1Q15067 660 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RPE65Q16518 533 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC18A3Q16572 532 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CR1LQ2VPA4 569 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MAJINQ3KP22 176 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GAGE13Q4V321 117 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ZMAT1Q5H9K5 638 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ZNF667Q5HYK9 610 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RARS2Q5T160 578 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ATAD3BQ5T9A4 648 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SERTAD4-AS1Q5TG53 156 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SHEQ5VZ18 495 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 KRT79Q5XKE5 535 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RNF43Q68DV7 783 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TMEM132EQ6IEE7 984 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PSRC1Q6PGN9 363 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SUSD1Q6UWL2 747 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MFSD7Q6UXD7 560 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ISLR2Q6UXK2 745 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RPTNQ6XPR3 784 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HIST3H2AQ7L7L0 130 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PLEKHH3Q7Z736 793 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CENPVQ7Z7K6 275 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 STK32CQ86UX6 486 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM83AQ86UY5 434 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 LUZP1Q86V48 1076 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM160B2Q86V87 743 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IGDCC3Q8IVU1 814 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NPAS3Q8IXF0 933 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TIGD4Q8IY51 512 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IZUMO1Q8IYV9 350 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GUF1Q8N442 669 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SVOPQ8N4V2 548 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ZNF808Q8N4W9 903 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ZCCHC9Q8N567 271 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 AMER2Q8N7J2 671 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MRPL43Q8N983 215 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM184AQ8NB25 1140 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms