RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SRCP12931 536 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 PRF1P14222 555 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 DLG4P78352 724 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 ABHD18Q0P651 414 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
HERC1-210ENST00000560897 CLPPQ16740 277 aaPredicted RBP9.7□□□□□ -0.86
HERC1-210ENST00000560897 EDRF1Q3B7T1 1238 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 C8orf34Q49A92 452 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 C14orf28Q4W4Y0 310 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 ATP1A1-AS1Q5TC04 95 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 UNC5BQ8IZJ1 945 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 SCML4Q8N228 414 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 ATP6V0D2Q8N8Y2 350 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 SLC4A11Q8NBS3 891 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 CHST14Q8NCH0 376 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 GPR156Q8NFN8 814 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 OR2A12Q8NGT7 310 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
HERC1-210ENST00000560897 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 ARHGEF26Q96DR7 871 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 TCTN2Q96GX1 697 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 BTN2A3PQ96KV6 586 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 FEM1AQ9BSK4 669 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
HERC1-210ENST00000560897 C1QTNF2Q9BXJ5 285 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
HERC1-210ENST00000560897 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 ENTPD4Q9Y227 616 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 POLHQ9Y253 713 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 HS3ST2Q9Y278 367 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 LOC101059948A0A1B0GTJ6 334 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 A0A1B0GTL3 188 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 TMEM110-MUSTN1A8MSY1 372 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 B4DGG1 531 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 NUDT21O43809 227 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 DIAPH2O60879 1101 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 CD19P15391 556 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 ALDH4A1P30038 563 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 L1CAMP32004 1257 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 IGFALSP35858 605 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 MTORP42345 2549 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 PPM1FP49593 454 aaPredicted RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 ARSDP51689 593 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 CLCN6P51797 869 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 RAD23BP54727 409 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 ELOAQ14241 798 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 INPP5JQ15735 1006 aaPredicted RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 KNOP1Q1ED39 458 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 CXorf57Q6NSI4 855 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 ENPP7Q6UWV6 458 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 BRAPQ7Z569 592 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 TAF8Q7Z7C8 310 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 MCEMP1Q8IX19 187 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 FAM46DQ8NEK8 389 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 TMC2Q8TDI7 906 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 TSACCQ96A04 125 aaPredicted RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 RAB7BQ96AH8 199 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 RPRD1AQ96P16 312 aaPredicted RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 ABCA2Q9BZC7 2435 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 SLAMF7Q9NQ25 335 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 CELSR1Q9NYQ6 3014 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 KLQ9UEF7 1012 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 XPO7Q9UIA9 1087 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 TLK1Q9UKI8 766 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 PILRAQ9UKJ1 303 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 PNMA8BQ9ULN7 279 aaPredicted RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 FRMD4BQ9Y2L6 1034 aa9.69□□□□□ -0.86
HERC1-210ENST00000560897 OAS3Q9Y6K5 1087 aaKnown RBP9.69□□□□□ -0.86
HERC1-210ENST00000560897 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 IGHV5-10-1A0A0J9YXX1 117 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 RHPN2P1A8MT19 583 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 PIK3R2O00459 728 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 LRCH4O75427 683 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 FBXO21O94952 628 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 TNFP01375 233 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 RRM1P23921 792 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 RGS7P49802 495 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 DNA2P51530 1060 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 PGDP52209 483 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 PMS2P54278 862 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 NADK2Q4G0N4 442 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 ZC3H12AQ5D1E8 599 aaKnown RBP9.68□□□□□ -0.86
HERC1-210ENST00000560897 ANKS6Q68DC2 871 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 C22orf39Q6P5X5 142 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 PDILTQ8N807 584 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 KIAA1524Q8TCG1 905 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 TAS1R2Q8TE23 839 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 CXorf40AQ8TE69 158 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 FAM149B1Q96BN6 582 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 SLC39A13Q96H72 371 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 NUDT22Q9BRQ3 303 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 TRIM62Q9BVG3 475 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 TNKS2Q9H2K2 1166 aa9.68□□□□□ -0.86
HERC1-210ENST00000560897 DPEP2Q9H4A9 486 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms