RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PREBQ9HCU5 417 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TM9SF3Q9HD45 589 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 LUC7LQ9NQ29 371 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 FADS3Q9Y5Q0 445 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SPTBN2O15020 2390 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 LRRD1A4D1F6 860 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 C16orf96A6NNT2 1141 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 ARHGAP33O14559 1287 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 AP1G1O43747 822 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 ADRB3P13945 408 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 NEK3P51956 506 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 GBE1Q04446 702 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 NSUN2Q08J23 767 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 TMCO4Q5TGY1 634 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC9A4Q6AI14 798 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 NEK5Q6P3R8 708 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 GDPD4Q6W3E5 623 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 SRLQ86TD4 932 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 LRRC49Q8IUZ0 686 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 PGBD5Q8N414 524 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 PLD5Q8N7P1 536 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 PPP1R16AQ96I34 528 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 KLHL32Q96NJ5 620 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 TSGA13Q96PP4 275 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 OSBPL1AQ9BXW6 950 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 DYRK4Q9NR20 520 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 DKK3Q9UBP4 350 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 TPX2Q9ULW0 747 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 ZFR2Q9UPR6 939 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 ADAMTS9Q9P2N4 1935 aa15.47■□□□□ 0.07
SNRPA1-213ENST00000560856 A0A1W2PR77 199 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TSPAN11A1L157 253 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 C4orf47A7E2U8 309 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 AREL1O15033 823 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 SPOPO43791 374 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 GJB3O75712 270 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 MAP3K6O95382 1288 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 WNT1P04628 370 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TIMP2P16035 220 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 CR2P20023 1033 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 GARSP41250 739 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 ID4P47928 161 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 MARCKSL1P49006 195 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 CSNK1EP49674 416 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 RACK1P63244 317 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 RAD51Q06609 339 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 CCDC15Q0P6D6 951 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 ZNF284Q2VY69 593 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TMEM259Q4ZIN3 620 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 MFSD7Q6UXD7 560 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 ATPAF2Q8N5M1 289 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TEX26Q8N6G2 289 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 RNF25Q96BH1 459 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC6A18Q96N87 628 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 DESI2Q9BSY9 194 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 SUV39H2Q9H5I1 410 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TMEM9BQ9NQ34 198 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 DDX56Q9NY93 547 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 DTLQ9NZJ0 730 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 SEPT3Q9UH03 358 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 DNAH14Q0VDD8 3507 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 TRPM6Q9BX84 2022 aa15.46■□□□□ 0.07
SNRPA1-213ENST00000560856 CACNA1AO00555 2505 aa15.46■□□□□ 0.06
SNRPA1-213ENST00000560856 A0A1B0GVT2 93 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 A0A1W2PQU0 124 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 RNGTTO60942 597 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 PIGNO95427 931 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 KRT1P04264 644 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 TNNT1P13805 278 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 ITIH2P19823 946 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 MAT2AP31153 395 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 CDKN2BP42772 138 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 GRIA4P48058 902 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 AFF3P51826 1226 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 GSDMDP57764 484 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 GRIK2Q13002 908 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 PUM1Q14671 1186 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 ZFYVE27Q5T4F4 411 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 FBXL19Q6PCT2 694 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 LAYNQ6UX15 382 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 HORMAD1Q86X24 394 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 ZSWIM9Q86XI8 627 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 CAMK1DQ8IU85 385 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 LRRC57Q8N9N7 239 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 OR2I1PQ8NGU4 316 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 HCAR2Q8TDS4 363 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 MAML1Q92585 1016 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 KRT35Q92764 455 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 FATE1Q969F0 183 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 RTKNQ9BST9 563 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 CDV3Q9UKY7 258 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 PLXNA2O75051 1894 aa15.45■□□□□ 0.06
SNRPA1-213ENST00000560856 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 GRID2IPA4D2P6 1211 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 SYPP08247 313 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms