RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PPP6R3Q5H9R7 873 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-210ENST00000559092 ATXN7L2Q5T6C5 722 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-210ENST00000559092 SEL1L3Q68CR1 1132 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 TTC7BQ86TV6 843 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 SLCO6A1Q86UG4 719 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 CHCHD4Q8N4Q1 142 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 NIPA2Q8N8Q9 360 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 LENG8Q96PV6 779 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-210ENST00000559092 SLC39A8Q9C0K1 460 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 THAP2Q9H0W7 228 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 PDFQ9HBH1 243 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 KLHL11Q9NVR0 708 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 IP6K2Q9UHH9 426 aa17.85■□□□□ 0.45
SMAD3-210ENST00000559092 NEMP1O14524 444 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 PROS1P07225 676 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 THEGLP0DJG4 465 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 SPINK2P20155 84 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 EPHA8P29322 1005 aaPredicted RBP17.84■□□□□ 0.45
SMAD3-210ENST00000559092 PAPOLAP51003 745 aaKnown RBP17.84■□□□□ 0.45
SMAD3-210ENST00000559092 SGCGQ13326 291 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 DPYSQ14117 519 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 TRIM14Q14142 442 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 RFTN1Q14699 578 aaPredicted RBP17.84■□□□□ 0.45
SMAD3-210ENST00000559092 DPYSL2Q16555 572 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 CCDC122Q5T0U0 273 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 SPECC1LQ69YQ0 1117 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 ABI3BPQ7Z7G0 1075 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 TEKT4Q8WW24 435 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 KLK6Q92876 244 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 IFT43Q96FT9 208 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 KLHL32Q96NJ5 620 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 C1QTNF2Q9BXJ5 285 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 TOR4AQ9NXH8 423 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 CWC15Q9P013 229 aaKnown RBP17.84■□□□□ 0.45
SMAD3-210ENST00000559092 ASPMQ8IZT6 3477 aa17.84■□□□□ 0.45
SMAD3-210ENST00000559092 CABIN1Q9Y6J0 2220 aa17.83■□□□□ 0.45
SMAD3-210ENST00000559092 TMEM8BA6NDV4 472 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 H3BRJ5 948 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 J3KR12 359 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 MYO1FO00160 1098 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 AREL1O15033 823 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 PAK4O96013 591 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-210ENST00000559092 ATXN1LP0C7T5 689 aaKnown RBP17.83■□□□□ 0.44
SMAD3-210ENST00000559092 IL1R2P27930 398 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 CSNK1DP48730 415 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 ST3GAL2Q16842 350 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 UNQ6494/PRO21346Q6UXR6 183 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 GATAD2AQ86YP4 633 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 ARHGAP12Q8IWW6 846 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 PNPLA1Q8N8W4 532 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 OR8K1Q8NGG5 319 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 CELF6Q96J87 481 aaKnown RBP17.83■□□□□ 0.44
SMAD3-210ENST00000559092 ZNF641Q96N77 438 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-210ENST00000559092 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 TSPY26PQ9H489 355 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 LHX3Q9UBR4 397 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 FTSJ1Q9UET6 329 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 CA5BQ9Y2D0 317 aa17.83■□□□□ 0.44
SMAD3-210ENST00000559092 IGLON5A6NGN9 336 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 CDK4P11802 303 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 ARL4AP40617 200 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 ABL2P42684 1182 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 IL10RBQ08334 325 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMAD3-210ENST00000559092 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
SMAD3-210ENST00000559092 FGL2Q14314 439 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 KANSL1Q7Z3B3 1105 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 POLNQ7Z5Q5 900 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 KDF1Q8NAX2 398 aaPredicted RBP17.82■□□□□ 0.44
SMAD3-210ENST00000559092 GATA6Q92908 595 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 BMFQ96LC9 184 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 TUBGCP5Q96RT8 1024 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 DNAJC7Q99615 494 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 TMEM121BQ9BXQ6 578 aaPredicted RBP17.82■□□□□ 0.44
SMAD3-210ENST00000559092 ZNHIT6Q9NWK9 470 aaKnown RBP17.82■□□□□ 0.44
SMAD3-210ENST00000559092 LCMT1Q9UIC8 334 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 KLK13Q9UKR3 277 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 NENFQ9UMX5 172 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 PCDHGA1Q9Y5H4 931 aa17.82■□□□□ 0.44
SMAD3-210ENST00000559092 A6NNZ2 444 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 PALMO75781 387 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 LDOC1O95751 146 aaPredicted RBP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 C1SP09871 688 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 RARAP10276 462 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 TIMP2P16035 220 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 EIF4A3P38919 411 aaKnown RBP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 RABIFP47224 123 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 BNIP3Q12983 259 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 TSR1Q2NL82 804 aaKnown RBP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 BRAT1Q6PJG6 821 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 KYAT3Q6YP21 454 aaKnown RBP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 GCNT7Q6ZNI0 430 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 Q6ZSR6 202 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 DENND6BQ8NEG7 585 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 OR13H1Q8NG92 308 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 ZNF599Q96NL3 588 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 SUV39H2Q9H5I1 410 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms