RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 EGFP01133 1207 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 UQCRHP07919 91 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 MYBL2P10244 700 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 KIR2DL1P43626 348 aaPredicted RBP18.3■□□□□ 0.52
CLPX-203ENST00000558958 AP1S1P61966 158 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 GRSF1Q12849 480 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLPX-203ENST00000558958 E2F5Q15329 346 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 MLF2Q15773 248 aaPredicted RBP18.3■□□□□ 0.52
CLPX-203ENST00000558958 CARD16Q5EG05 197 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 EMC10Q5UCC4 262 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 EGFLAMQ63HQ2 1017 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 NCEH1Q6PIU2 408 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 TPRG1Q6ZUI0 275 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 Q6ZVU0 165 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 MCUQ8NE86 351 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 OR2A12Q8NGT7 310 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 FAM3CQ92520 227 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 MRGPRX2Q96LB1 330 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 LRRC40Q9H9A6 602 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 MUC22E2RYF6 1773 aaPredicted RBP18.3■□□□□ 0.52
CLPX-203ENST00000558958 NPC1O15118 1278 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 CHRM1P11229 460 aaPredicted RBP18.29■□□□□ 0.52
CLPX-203ENST00000558958 ADRA1AP35348 466 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 MAPK8P45983 427 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 WNT3AP56704 352 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 ENPP2Q13822 863 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 SPARCL1Q14515 664 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 MYLK3Q32MK0 819 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 DPY19L3Q6ZPD9 716 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 ZCCHC9Q8N567 271 aaKnown RBP18.29■□□□□ 0.52
CLPX-203ENST00000558958 IPMKQ8NFU5 416 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 OR6K2Q8NGY2 324 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLPX-203ENST00000558958 PTPRN2Q92932 1015 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 HECAQ9UBI9 543 aaPredicted RBP18.29■□□□□ 0.52
CLPX-203ENST00000558958 WNT16Q9UBV4 365 aa18.29■□□□□ 0.52
CLPX-203ENST00000558958 EVLQ9UI08 416 aaPredicted RBP18.29■□□□□ 0.52
CLPX-203ENST00000558958 GOLGA8MH3BSY2 632 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 MAN2B1O00754 1011 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 POP4O95707 220 aaKnown RBP18.28■□□□□ 0.52
CLPX-203ENST00000558958 IL12RB1P42701 662 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 CCNHP51946 323 aaPredicted RBP18.28■□□□□ 0.52
CLPX-203ENST00000558958 HNRNPA1L2Q32P51 320 aaKnown RBP18.28■□□□□ 0.52
CLPX-203ENST00000558958 GSPT2Q8IYD1 628 aaKnown RBP18.28■□□□□ 0.52
CLPX-203ENST00000558958 ZNF366Q8N895 744 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 ZNF513Q8N8E2 541 aaPredicted RBP18.28■□□□□ 0.52
CLPX-203ENST00000558958 KCNV2Q8TDN2 545 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 VOPP1Q96AW1 172 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 ACOX2Q99424 681 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 MTG2Q9H4K7 406 aa18.28■□□□□ 0.52
CLPX-203ENST00000558958 EDDM13A0A1B0GTR0 161 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 WASH3PC4AMC7 463 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 BNIP3LO60238 219 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 HLA-EP13747 358 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 GRIA1P42261 906 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 RECQLP46063 649 aaPredicted RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 SEC13P55735 322 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 SARNPP82979 210 aaKnown RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 PRKCQQ04759 706 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 OLIG2Q13516 323 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 PCSK7Q16549 785 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 NAPEPLDQ6IQ20 393 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 RANBP10Q6VN20 620 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 PPP1R21Q6ZMI0 780 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 ZNF534Q76KX8 674 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 CAND1Q86VP6 1230 aaKnown RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 RYBPQ8N488 228 aaPredicted RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 PWWP2AQ96N64 755 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 SERPINB12Q96P63 405 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 FMO2Q99518 471 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 TBL1YQ9BQ87 522 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 FICDQ9BVA6 458 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 FSD1LQ9BXM9 530 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 FRMD8Q9BZ67 464 aaPredicted RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 CPEB1Q9BZB8 566 aaKnown RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 FOXP3Q9BZS1 431 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 ZDHHC4Q9NPG8 344 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 CACNA2D2Q9NY47 1150 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 MTRF1LQ9UGC7 380 aaKnown RBP18.27■□□□□ 0.52
CLPX-203ENST00000558958 CA14Q9ULX7 337 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 PCDHGC4Q9Y5F7 938 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 TRIOO75962 3097 aa18.27■□□□□ 0.52
CLPX-203ENST00000558958 LOC285095A0A1B0GVY8 99 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 USP12O75317 370 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 AGTP01019 485 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 EPOP01588 193 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CD72P21854 359 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 PRKCHP24723 683 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 GKP32189 559 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TIE1P35590 1138 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 RAD51Q06609 339 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CDK18Q07002 472 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CCINQ13939 588 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 C9orf64Q5T6V5 341 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 LRRC8BQ6P9F7 803 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 ZNF852Q6ZMS4 543 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 KDELC2Q7Z4H8 507 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms