RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DENND6BQ8NEG7 585 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 STARD8Q92502 1023 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 RNF34Q969K3 372 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 PDXPQ96GD0 296 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 FEM1CQ96JP0 617 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 ZSWIM1Q9BR11 485 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 CDH19Q9H159 772 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-206ENST00000558739 HESX1Q9UBX0 185 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 PCDHGA3Q9Y5H0 932 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 B4DGG1 531 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 TCP11X1B4DZS4 312 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 DDAH2O95865 285 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 APOEP02649 317 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 MPSTP25325 297 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 OR1D5P58170 312 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 B4GALNT1Q00973 533 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 STK4Q13043 487 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 NNTQ13423 1086 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 ELOCQ15369 112 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 TCTN3Q6NUS6 607 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 FSTL5Q8N475 847 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-206ENST00000558739 IRGQQ8WZA9 623 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 FUBP1Q96AE4 644 aaKnown RBP12.06□□□□□ -0.48
SMAD3-206ENST00000558739 BTN2A3PQ96KV6 586 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 TAAR9Q96RI9 348 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 C7orf25Q9BPX7 421 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 B3GNT4Q9C0J1 378 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 MUC3BQ9H195 1237 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 PILRAQ9UKJ1 303 aa12.06□□□□□ -0.48
SMAD3-206ENST00000558739 ACANP16112 2415 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 A0A0D9SEW6 157 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 B4GAT1O43505 415 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 DNAJB5O75953 348 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 ALPIP09923 528 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 FURINP09958 794 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 GLB1P16278 677 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 CUL4BQ13620 913 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 SEPT6Q14141 434 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 HLTFQ14527 1009 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 IRF4Q15306 451 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 NADK2Q4G0N4 442 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 ANKS6Q68DC2 871 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 LVRNQ6Q4G3 990 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 TIPARPQ7Z3E1 657 aaKnown RBP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 OR6K2Q8NGY2 324 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 SLC35F5Q8WV83 523 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 SCG3Q8WXD2 468 aaKnown RBP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 VOPP1Q96AW1 172 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 FAM149B1Q96BN6 582 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 PPP1R16AQ96I34 528 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 UNKQ9C0B0 810 aaKnown RBP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 OCIAD1Q9NX40 245 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 TMEM9Q9P0T7 183 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 LRIT1Q9P2V4 623 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 VANGL2Q9ULK5 521 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-206ENST00000558739 MAP4K5Q9Y4K4 846 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 ACTL7AQ9Y615 435 aa12.05□□□□□ -0.48
SMAD3-206ENST00000558739 SYNJ2BP-COX16A0A087WUM0 186 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 KCNU1A8MYU2 1149 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 M0QYT0 321 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 M0QYV0 167 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 AP1G1O43747 822 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CPNE6O95741 557 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CTSEP14091 401 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 ITIH2P19823 946 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 F8A1P23610 371 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 L1CAMP32004 1257 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CSF2RBP32927 897 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 MAZP56270 477 aaKnown RBP12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CCDC13Q8IYE1 715 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 TP53I13Q8NBR0 393 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CCL4L1Q8NHW4 92 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 POM121Q96HA1 1249 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 USP28Q96RU2 1077 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 CTRCQ99895 268 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 COX16Q9P0S2 106 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 LUZP4Q9P127 313 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms