RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 NELL1Q92832 810 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 GLG1Q92896 1179 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MAGOHBQ96A72 148 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 VOPP1Q96AW1 172 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 OPTNQ96CV9 577 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 NMD3Q96D46 503 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZNF333Q96JL9 665 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TRIM4Q9C037 500 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZNF518BQ9C0D4 1074 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 VPS16Q9H269 839 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 NEUROG2Q9H2A3 272 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 DPH5Q9H2P9 285 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MLXIPQ9HAP2 919 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 FAM114A2Q9NRY5 505 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 AGPAT5Q9NUQ2 364 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 DLL3Q9NYJ7 618 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CYP39A1Q9NYL5 469 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 VPS54Q9P1Q0 977 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 PDP2Q9P2J9 529 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CNOT7Q9UIV1 285 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 TFR2Q9UP52 801 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 FRMPD2Q68DX3 1309 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 MYH4Q9Y623 1939 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 A0A1B0GUL6 1792 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 A1L4Q6 167 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 MBD3L4A6NDZ8 208 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 MBD3L3A6NE82 208 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 TMEM221A6NGB7 291 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ISM1B1AKI9 464 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PSMA7O14818 248 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 RNMTO43148 476 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 GPAA1O43292 621 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 KCNQ3O43525 872 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 STRNO43815 780 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 HNRNPCL1O60812 293 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 SMIM24O75264 130 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ATP5HO75947 161 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TJP3O95049 919 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 RPN1P04843 607 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 MYF5P13349 255 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 IL1R1P14778 569 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 BRAFP15056 766 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CPA3P15088 417 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CHN1P15882 459 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 RHCEP18577 417 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ATF3P18847 181 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TRIM21P19474 475 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 EIF2S2P20042 333 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 YY1P25490 414 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PEX2P28328 305 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CD38P28907 300 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 CTNNA1P35221 906 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 LONP1P36776 959 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 STAT6P42226 847 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CACNB3P54284 484 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 MRPS25P82663 173 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 RHDQ02161 417 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 NEXNQ0ZGT2 675 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SEMA5AQ13591 1074 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CNGA2Q16280 664 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CCDC142Q17RM4 750 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CCDC96Q2M329 555 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 MGAT5BQ3V5L5 792 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 C3orf38Q5JPI3 329 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 C10orf76Q5T2E6 689 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 DEPDC1Q5TB30 811 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ANKRD16Q6P6B7 361 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PDXDC1Q6P996 788 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 RGS9BPQ6ZS82 235 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SLFN11Q7Z7L1 901 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 WDR75Q8IWA0 830 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 NELFCDQ8IXH7 590 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 LRRC34Q8IZ02 419 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 LRRC57Q8N9N7 239 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SMYD1Q8NB12 490 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 BPIFB1Q8TDL5 484 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TMEM171Q8WVE6 324 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SOCS4Q8WXH5 440 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PRCCQ92733 491 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 PHKBQ93100 1093 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TIFAQ96CG3 184 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 KLHL29Q96CT2 875 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 R3HDM4Q96D70 268 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 REPS1Q96D71 796 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 APIPQ96GX9 242 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 EPSTI1Q96J88 318 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 CNOT6LQ96LI5 555 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 CCDC42Q96M95 316 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 RAB3IPQ96QF0 476 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 IWS1Q96ST2 819 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 KRT12Q99456 494 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 LZTS2Q9BRK4 669 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TUBGCP2Q9BSJ2 902 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 VCXQ9H320 206 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms