RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ELF4Q99607 663 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 EIF3CQ99613 913 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC39A8Q9C0K1 460 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 THAP2Q9H0W7 228 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ZDHHC6Q9H6R6 413 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 MRPL47Q9HD33 250 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 DYRK4Q9NR20 520 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 NENFQ9UMX5 172 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CA5BQ9Y2D0 317 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PCDHB9Q9Y5E1 797 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 FADS3Q9Y5Q0 445 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ACACAQ13085 2346 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ASXL3Q9C0F0 2248 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 C16orf96A6NNT2 1141 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PRAMEF26H0Y7S4 382 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 J3KR12 359 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 EEF2KO00418 725 aaKnown RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 KRIT1O00522 736 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC31A1O15431 190 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 AP1G1O43747 822 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 HYAL3O43820 417 aaPredicted RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PRAMEF11O60813 436 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PCDH8O95206 1070 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 UGT2B4P06133 528 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PRLRP16471 622 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ERCC2P18074 760 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ABL2P42684 1182 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 RXRGP48443 463 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 HCAR3P49019 387 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 IL9RQ01113 521 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 OVGP1Q12889 678 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 DPYSQ14117 519 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 FGL2Q14314 439 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 STAT4Q14765 748 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SUZ12Q15022 739 aaKnown RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PROX2Q3B8N5 592 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 BOLA3Q53S33 107 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC45A4Q5BKX6 768 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF805Q5CZA5 627 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PPP6R3Q5H9R7 873 aaPredicted RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SEL1L3Q68CR1 1132 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 TXNRD3NBQ6F5E7 133 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ALKBH5Q6P6C2 394 aaKnown RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 FBXL19Q6PCT2 694 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 RFX8Q6ZV50 586 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 RAB44Q7Z6P3 723 aaPredicted RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 VPS36Q86VN1 386 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 IQCHQ86VS3 1027 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ARHGAP12Q8IWW6 846 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 RYBPQ8N488 228 aaPredicted RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 NIPA2Q8N8Q9 360 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 RHBDD1Q8TEB9 315 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SAP25Q8TEE9 199 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ARHGEF26Q96DR7 871 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 CELF6Q96J87 481 aaKnown RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 BTBD6Q96KE9 485 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 KLHL32Q96NJ5 620 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 NCAPGQ9BPX3 1015 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 SCNM1Q9BWG6 230 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 TSPY26PQ9H489 355 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ERVMER34-1Q9H9K5 563 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 PDFQ9HBH1 243 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 FZD3Q9NPG1 666 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 GDF3Q9NR23 364 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 TOR4AQ9NXH8 423 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 DONSONQ9NYP3 566 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 CWC15Q9P013 229 aaKnown RBP8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 LHX3Q9UBR4 397 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 MFHAS1Q9Y4C4 1052 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.91□□□□□ -0.981e-7■□□□□ 11.2
SNRPA1-206ENST00000558059 WDFY3Q8IZQ1 3526 aa8.91□□□□□ -0.98
SNRPA1-206ENST00000558059 ANKRD11Q6UB99 2663 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 FREM2Q5SZK8 3169 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 COL5A1P20908 1838 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 ARHGAP42A6NI28 874 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 AREL1O15033 823 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 RAD51BO15315 384 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 INSIG1O15503 277 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 SPINT1O43278 529 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 DKK1O94907 266 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 TRIM16O95361 564 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 ATXN1LP0C7T5 689 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 FTH1P19P0C7X4 201 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 RARAP10276 462 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 TIMP2P16035 220 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 HNRNPA2B1P22626 353 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 EIF4A3P38919 411 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 GRK6P43250 576 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 PAPOLAP51003 745 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF135P52742 658 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 RHOAP61586 193 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 RPS21P63220 83 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC25A11Q02978 314 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 BNIP3Q12983 259 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 PIGHQ14442 188 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 NFKBIBQ15653 356 aa8.9□□□□□ -0.98
SNRPA1-206ENST00000558059 DPYSL2Q16555 572 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms