RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 AKAP1Q92667 903 aaKnown RBP eCLIP3.93□□□□□ -1.78
TDP1-217ENST00000557782 MIEF2Q96C03 454 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ERO1AQ96HE7 468 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 RUNDC3BQ96NL0 473 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FYTTD1Q96QD9 318 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 LRRC37BQ96QE4 947 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 OR14A2Q96R54 314 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 LMF1Q96S06 567 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PRR25Q96S07 402 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MLPHQ9BV36 600 aaPredicted RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 NUP85Q9BW27 656 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FAM129AQ9BZQ8 928 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PDZD7Q9H5P4 517 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 DENND2DQ9H6A0 471 aaPredicted RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 SEC61A2Q9H9S3 476 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ABCB8Q9NUT2 735 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 INTS10Q9NVR2 710 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 AKAP7Q9P0M2 348 aaPredicted RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 ABI3Q9P2A4 366 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 HOOK1Q9UJC3 728 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 BLOC1S6Q9UL45 172 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SH2B3Q9UQQ2 575 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PKP3Q9Y446 797 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 IGSF1Q8N6C5 1336 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 KRT87PA6NCN2 255 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TRIM64CA6NLI5 447 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 C17orf100A8MU93 164 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 MCIDASD6RGH6 385 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 AP4M1O00189 453 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 DNM1LO00429 736 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 NDC80O14777 642 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ASAP2O43150 1006 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SEC22BO75396 215 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TADA2AO75478 443 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 STAM2O75886 525 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 RAD17O75943 681 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SERPINC1P01008 464 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PENKP01210 267 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 HLA-DQA2P01906 255 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ITGB2P05107 769 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ELANEP08246 267 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PCP11498 1178 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 ACTN1P12814 892 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SLC2A4P14672 509 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PTPN2P17706 415 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 CTPS1P17812 591 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 GATA3P23771 443 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 MC5RP33032 325 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 RFC1P35251 1148 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 PTPN9P43378 593 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 AGTR2P50052 363 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 VAV2P52735 878 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PDE1AP54750 535 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ADPRHP54922 357 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 HSD17B7P56937 341 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 NXPH1P58417 271 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ARF5P84085 180 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 E2F1Q01094 437 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 KIAA2012Q0VF49 1180 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 RPA4Q13156 261 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TUBB2AQ13885 445 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 FGFBP1Q14512 234 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TAF7Q15545 349 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 CNGA3Q16281 694 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 CYP1B1Q16678 543 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 CYP2A13Q16696 494 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ALG11Q2TAA5 492 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 PDCD4Q53EL6 469 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 DAB2IPQ5VWQ8 1189 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 NAIF1Q69YI7 327 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 KYAT3Q6YP21 454 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 LINC00696Q6ZRV3 163 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ARHGEF18Q6ZSZ5 1173 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 MOB3CQ70IA8 216 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 CAMKMTQ7Z624 323 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 WDR63Q8IWG1 891 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 HACE1Q8IYU2 909 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 ADGRF3Q8IZF5 1079 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SYCP3Q8IZU3 236 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TMEM132CQ8N3T6 1108 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 GUF1Q8N442 669 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 PI4KAP1Q8N8J0 262 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TSPAN14Q8NG11 270 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 LILRB1Q8NHL6 650 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 PSMA8Q8TAA3 256 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SPATA20Q8TB22 786 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 LRRC59Q96AG4 307 aaKnown RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 BOD1Q96IK1 185 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 OR2A14Q96R47 310 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 AGAP2Q99490 1192 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SPXQ9BT56 116 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 GLIS2Q9BZE0 524 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 WDR11Q9BZH6 1224 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 TRIM2Q9C040 744 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 GALNT9Q9HCQ5 603 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 RANGRFQ9HD47 186 aaPredicted RBP3.92□□□□□ -1.78
TDP1-217ENST00000557782 PCMTD2Q9NV79 361 aa3.92□□□□□ -1.78
TDP1-217ENST00000557782 SETD4Q9NVD3 440 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms