RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LAMP3Q9UQV4 416 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 FRMD4BQ9Y2L6 1034 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TNPO2O14787 897 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TFP02787 698 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 HSPA1AP0DMV8 641 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 HSPA1BP0DMV9 641 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 GPTP24298 496 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 PEX19P40855 299 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 SKIV2L2P42285 1042 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TRPC1P48995 793 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 CYP2J2P51589 502 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 POU5F1Q01860 360 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 ID2Q02363 134 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 EPS8Q12929 822 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 PDCLQ13371 301 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 DUSP28Q4G0W2 176 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 SLC45A4Q5BKX6 768 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 FAM171A1Q5VUB5 890 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 FAM180BQ6P0A1 224 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 CDC73Q6P1J9 531 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 SERPINA11Q86U17 422 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 DIS3L2Q8IYB7 885 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TCP11L2Q8N4U5 519 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 MAGEC3Q8TD91 643 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TRPC4APQ8TEL6 797 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 ADAMTS14Q8WXS8 1223 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGEF2Q92974 986 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 ZUFSPQ96AP4 578 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 EYA3Q99504 573 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 B3GNT4Q9C0J1 378 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TRMT1Q9NXH9 659 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 MAP3K20Q9NYL2 800 aaKnown RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 FBXO9Q9UK97 447 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 A4GNTQ9UNA3 340 aa1.82□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM184BQ9Y519 407 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-212ENST00000557538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TIMM44O43615 452 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 STRNO43815 780 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 EPN2O95208 641 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 FSHBP01225 129 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MMP2P08253 660 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ACADMP11310 421 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ST6GAL1P15907 406 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CAPN2P17655 700 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CTPS1P17812 591 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ALOX12P18054 663 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 AGAP20933 346 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ALDH1B1P30837 517 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ZP1P60852 638 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PRAMEP78395 509 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 IFT88Q13099 833 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 STIM1Q13586 685 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PCGF3Q3KNV8 242 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 LINGO2Q7L985 606 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MRPL10Q7Z7H8 261 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 AMIGO2Q86SJ2 522 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SFTPA2Q8IWL1 248 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MCEMP1Q8IX19 187 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 METTL6Q8TCB7 284 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 RUFY2Q8WXA3 655 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 OTULINQ96BN8 352 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 FAM110AQ9BQ89 295 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SH2D3AQ9BRG2 576 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 USP44Q9H0E7 712 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PLEKHA5Q9HAU0 1116 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TLR8Q9NR97 1041 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 THSD1Q9NS62 852 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 DIAPH3Q9NSV4 1193 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM45AQ9NWC5 275 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 AASSQ9UDR5 926 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 AGAP14A8MT82 685 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 VGLL3A8MV65 326 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CHL1O00533 1208 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 HSPB6O14558 160 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 IPO8O15397 1037 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TMCC1O94876 653 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM191BP0C7N4 346 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CPA1P15085 419 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CD58P19256 250 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TNFRSF1BP20333 461 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 HOXD10P28358 340 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 DCTDP32321 178 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 RPP30P78346 268 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 NAA25Q14CX7 972 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 NFIL3Q16649 462 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SGO1Q5FBB7 561 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CC2D1BQ5T0F9 858 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SERTAD4-AS1Q5TG53 156 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 JADE1Q6IE81 842 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PLBD1Q6P4A8 553 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CYB5R4Q7L1T6 521 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 R3HCC1LQ7Z5L2 792 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PXKQ7Z7A4 578 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 WDR5BQ86VZ2 330 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 WDR63Q8IWG1 891 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM217Q8N7C4 229 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PLD5Q8N7P1 536 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 KLHL29Q96CT2 875 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ARSGQ96EG1 525 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms