RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ZNF77Q15935 545 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 GRTP1Q5TC63 336 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 PACS1Q6VY07 963 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 TIFABQ6ZNK6 161 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 TPGS1Q6ZTW0 290 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 KCNMB4Q86W47 210 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 UNC5BQ8IZJ1 945 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 C4orf33Q8N1A6 199 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 SLC25A41Q8N5S1 370 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-233ENST00000557529 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 ATXN2LQ8WWM7 1075 aaKnown RBP12.62□□□□□ -0.39
SHMT2-233ENST00000557529 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 GDF15Q99988 308 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 EPN3Q9H201 632 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 CCDC134Q9H6E4 229 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 SLC28A3Q9HAS3 691 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 C20orf96Q9NUD7 363 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-233ENST00000557529 VPS51Q9UID3 782 aa12.62□□□□□ -0.39
SHMT2-233ENST00000557529 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 TYROBPO43914 113 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 UGT1A9O60656 530 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SPAG7O75391 227 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 ZWINTO95229 277 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-233ENST00000557529 PRAMEF12O95522 483 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 NDST3O95803 873 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-233ENST00000557529 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
SHMT2-233ENST00000557529 ALADP13716 330 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 CEBPBP17676 345 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 CHRNA4P43681 627 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SCNN1BP51168 640 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SLC18A2Q05940 514 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SLC20A2Q08357 652 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 LMAN2Q12907 356 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SEPT6Q14141 434 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 MPP2Q14168 576 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 SIRPB2Q5JXA9 342 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 KIAA0930Q6ICG6 404 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-233ENST00000557529 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 BANPQ8N9N5 519 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 WFDC5Q8TCV5 224 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 GDPD5Q8WTR4 605 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 BHMTQ93088 406 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 UGT1A7Q9HAW7 530 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 UGT1A10Q9HAW8 530 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 UGT1A8Q9HAW9 530 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 TREX1Q9NSU2 369 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
SHMT2-233ENST00000557529 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
SHMT2-233ENST00000557529 GBF1Q92538 1859 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 TM9SF1O15321 606 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 CD160O95971 181 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 SPRP35270 261 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 CCNFP41002 786 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 CSE1LP55060 971 aaKnown RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 RHOAP61586 193 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 IL9RQ01113 521 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 PPARDQ03181 441 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 IHHQ14623 411 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 SEPT7Q16181 437 aaKnown RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 UGP2Q16851 508 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 PLEKHG6Q3KR16 790 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 HSP90AA5PQ58FG0 334 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 TEDDM1Q5T9Z0 273 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 LINGO4Q6UY18 593 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 ARID3BQ8IVW6 561 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 ING5Q8WYH8 240 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 PEX13Q92968 403 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 IRF7Q92985 503 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 APOPT1Q96IL0 206 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 SERAC1Q96JX3 654 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 TRIB3Q96RU7 358 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 MKS1Q9NXB0 559 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 PLK2Q9NYY3 685 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
SHMT2-233ENST00000557529 MKI67P46013 3256 aaKnown RBP12.6□□□□□ -0.39
SHMT2-233ENST00000557529 MROH6A6NGR9 719 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 COPEO14579 308 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 RFPL1O75677 317 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 PYGBP11216 843 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 HADHAP40939 763 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MAPK8P45983 427 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 RGRP47804 291 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 NUMBP49757 651 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 AP1S1P61966 158 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MSLNQ13421 630 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms