RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RBMS1P29558 406 aaKnown RBP6□□□□□ -1.45
VPS33B-207ENST00000557470 NNMTP40261 264 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CSRP3P50461 194 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CLDN2P57739 230 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 NFKB2Q00653 900 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 SULT2A1Q06520 285 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 SRSF1Q07955 248 aaKnown RBP eCLIP6□□□□□ -1.45
VPS33B-207ENST00000557470 NFATC3Q12968 1075 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF284Q2VY69 593 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 ZC3H12AQ5D1E8 599 aaKnown RBP6□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF542PQ5EBM4 170 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 PIP5KL1Q5T9C9 394 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 FAM46CQ5VWP2 391 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 RAP1GAP2Q684P5 730 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 IGF2-ASQ6U949 168 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 LCLAT1Q6UWP7 414 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 DSG4Q86SJ6 1040 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 TAC4Q86UU9 113 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 NLRP8Q86W28 1048 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CHSY1Q86X52 802 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 EXD3Q8N9H8 876 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 IFI44Q8TCB0 444 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 MAPK15Q8TD08 544 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 SLC35F5Q8WV83 523 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 EDARADDQ8WWZ3 215 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 OR8D1Q8WZ84 308 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 KLK6Q92876 244 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CCDC74AQ96AQ1 378 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 ATXN7L3BQ96GX2 97 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 PRR11Q96HE9 360 aaPredicted RBP6□□□□□ -1.45
VPS33B-207ENST00000557470 CEP63Q96MT8 703 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 NOX5Q96PH1 765 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 CALN1Q9BXU9 219 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 PREBQ9HCU5 417 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 ST7Q9NRC1 585 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 TJP2Q9UDY2 1190 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 IL17BQ9UHF5 180 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 NAALADL1Q9UQQ1 740 aa6□□□□□ -1.45
VPS33B-207ENST00000557470 COL27A1Q8IZC6 1860 aaPredicted RBP6□□□□□ -1.45
VPS33B-207ENST00000557470 A0A1W2PQU0 124 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CFAP69A5D8W1 941 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 NEMP2A6NFY4 417 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CDRT15L2A8MXV6 281 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 C1QTNF3-AMACRE9PGA6 284 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 MCF2LO15068 1137 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SCAMP1O15126 338 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CASC3O15234 703 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 STX10O60499 249 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 FBXO21O94952 628 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 APOEP02649 317 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ITGB2P05107 769 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 RPLP1P05386 114 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CTSLP07711 333 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 EPB41P11171 864 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 PFKFB1P16118 471 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF18P17022 549 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 HOXB4P17483 251 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CD33P20138 364 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 HNRNPA2B1P22626 353 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 AKT2P31751 481 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SOX5P35711 763 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DUSP3P51452 185 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 PLK1P53350 603 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 YWHAEP62258 255 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 TNP2Q05952 138 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 LRMPQ12912 555 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SLC12A1Q13621 1099 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DRAP1Q14919 205 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DLG2Q15700 870 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CDKN3Q16667 212 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ZSCAN23Q3MJ62 389 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ARL13BQ3SXY8 428 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ACCSLQ4AC99 568 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DCAF17Q5H9S7 520 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 C10orf62Q5T681 223 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SYPL2Q5VXT5 272 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SEL1L3Q68CR1 1132 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 OR6B2Q6IFH4 312 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CXorf57Q6NSI4 855 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 GUSBP11Q6P575 273 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 FIGNL1Q6PIW4 674 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 TMEM270Q6UE05 265 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CRTC1Q6UUV9 634 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CCDC81Q6ZN84 652 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 GCNT7Q6ZNI0 430 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 PTAR1Q7Z6K3 402 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ABI3BPQ7Z7G0 1075 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 HORMAD1Q86X24 394 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 LURAP1LQ8IV03 231 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 CCAR2Q8N163 923 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 GUF1Q8N442 669 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 GOLGA6L1Q8N7Z2 621 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF548Q8NEK5 533 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 OR52K2Q8NGK3 314 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 SVIPQ8NHG7 77 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ARRDC3Q96B67 414 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 FAM149B1Q96BN6 582 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 MFSD3Q96ES6 412 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 HSFY1Q96LI6 401 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms