RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 KLHL32Q96NJ5 620 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 AGPAT1Q99943 283 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 CAAP1Q9H8G2 361 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 USP29Q9HBJ7 922 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 EVA1BQ9NVM1 165 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 ANO10Q9NW15 660 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 CSNK1G3Q9Y6M4 447 aa16.13■□□□□ 0.17
TUBB3-213ENST00000557262 TDRD6O60522 2096 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 MYLKQ15746 1914 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 LGALS16A8MUM7 142 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 H3BM21 787 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 K7ESM1 405 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 RRP8O43159 456 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 OPA1O60313 960 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 UGT2B4P06133 528 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 NME1P15531 152 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 EPHB2P29323 1055 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 YBEYP58557 167 aaPredicted RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 PDE1CQ14123 709 aaPredicted RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 INO80DQ53TQ3 878 aaPredicted RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 EFHC2Q5JST6 749 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 GDPD4Q6W3E5 623 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 KDM7AQ6ZMT4 941 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 MON1BQ7L1V2 547 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 PARGQ86W56 976 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 PYROXD2Q8N2H3 581 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 RTL3Q8N8U3 475 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 DENND6BQ8NEG7 585 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 FGF11Q92914 225 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 TTYH3Q9C0H2 523 aa16.12■□□□□ 0.17
TUBB3-213ENST00000557262 NOL6Q9H6R4 1146 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
TUBB3-213ENST00000557262 TCRBV5S1A1TA0A578 114 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 AREL1O15033 823 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 CCP110O43303 1012 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 NEBLO76041 1014 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 GP1BAP07359 652 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ITPKBP27987 946 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ACTN2P35609 894 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 AIF1P55008 147 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 PFN3P60673 137 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 MYL5Q02045 173 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ATXN7L2Q5T6C5 722 aaPredicted RBP16.11■□□□□ 0.17
TUBB3-213ENST00000557262 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 CRELD1Q96HD1 420 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ABCG4Q9H172 646 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 KLF15Q9UIH9 416 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 GGT7Q9UJ14 662 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 FZD10Q9ULW2 581 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ITM2BQ9Y287 266 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 MFHAS1Q9Y4C4 1052 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 ASXL3Q9C0F0 2248 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 FASNP49327 2511 aaKnown RBP16.11■□□□□ 0.17
TUBB3-213ENST00000557262 CHD5Q8TDI0 1954 aa16.11■□□□□ 0.17
TUBB3-213ENST00000557262 IGSF10Q6WRI0 2623 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 LY6G6EA0A0G2JKS1 128 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 WASH4PA8MWX3 477 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 RASA4BC9J798 803 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 SPINT1O43278 529 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 AQP9O43315 295 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 RASA4O43374 803 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 CREB3O43889 395 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 BRINP1O60477 761 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 TMCC1O94876 653 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 IGSF6O95976 241 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 MYF5P13349 255 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 JUNDP17535 347 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
TUBB3-213ENST00000557262 PTK2BQ14289 1009 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 ACAP1Q15027 740 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 ACAD10Q6JQN1 1059 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
TUBB3-213ENST00000557262 DNAJC24Q6P3W2 148 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
TUBB3-213ENST00000557262 SNIP1Q8TAD8 396 aaKnown RBP16.1■□□□□ 0.17
TUBB3-213ENST00000557262 BTN2A2Q8WVV5 523 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 BAP1Q92560 729 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 EPAS1Q99814 870 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 CNPY3Q9BT09 278 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 CPEB1Q9BZB8 566 aaKnown RBP16.1■□□□□ 0.17
TUBB3-213ENST00000557262 KLC2Q9H0B6 622 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 CATSPERBQ9H7T0 1116 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 DKK3Q9UBP4 350 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 SALL4Q9UJQ4 1053 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 U3KQA8 63 aa16.1■□□□□ 0.17
TUBB3-213ENST00000557262 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
TUBB3-213ENST00000557262 TPP1O14773 563 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 MMP20O60882 483 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 TM7SF2O76062 418 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 TIMP2P16035 220 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 FERP16591 822 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 THOP1P52888 689 aa16.09■□□□□ 0.17
TUBB3-213ENST00000557262 RHOAP61586 193 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms