RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 NAT1P18440 290 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 POLR2EP19388 210 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 PRKCHP24723 683 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ECI1P42126 302 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 SGSHP51688 502 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 CDK17Q00537 523 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 APBA1Q02410 837 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 KCNJ12Q14500 433 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ATP13A4Q4VNC1 1196 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 DCAF6Q58WW2 860 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 TCP11X2Q5H9J9 407 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 MS4A13Q5J8X5 152 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 MBLAC2Q68D91 279 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 NADSYN1Q6IA69 706 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 DPY19L2P1Q6NXN4 242 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 KIAA1324Q6UXG2 1013 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 C8orf86Q6ZUL3 223 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ARMCX6Q7L4S7 300 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 TAC4Q86UU9 113 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ZDHHC17Q8IUH5 632 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ATP6V0D2Q8N8Y2 350 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 MFSD2AQ8NA29 543 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 KDM1BQ8NB78 822 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 SORCS1Q8WY21 1168 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 TTC17Q96AE7 1141 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 LMLNQ96KR4 655 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 BTN2A3PQ96KV6 586 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC2A13Q96QE2 648 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 CPXM1Q96SM3 734 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 NUP58Q9BVL2 599 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 SAMSN1Q9NSI8 373 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 ABCB8Q9NUT2 735 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 WSB2Q9NYS7 404 aaPredicted RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 USP36Q9P275 1121 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 NFE2L3Q9Y4A8 694 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 CEP250Q9BV73 2442 aa10.13□□□□□ -0.79
HNRNPC-228ENST00000557033 KCNU1A8MYU2 1149 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SERPINF2P08697 491 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 ACADMP11310 421 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 GNSP15586 552 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 CCR1P32246 355 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 CD70P32970 193 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 TPMTP51580 245 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 COPAP53621 1224 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC6A3Q01959 620 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 ZBTB16Q05516 673 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC12A1Q13621 1099 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 DRAP1Q14919 205 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 TAF5Q15542 800 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 WDR45BQ5MNZ6 344 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 KLHDC7AQ5VTJ3 777 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 RBM43Q6ZSC3 357 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC41A1Q8IVJ1 513 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 DEFB119Q8N690 84 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 C1orf131Q8NDD1 294 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 ZNF397Q8NF99 534 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 TOE1Q96GM8 510 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 NAA15Q9BXJ9 866 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 STK33Q9BYT3 514 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 PCED1AQ9H1Q7 454 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC6A17Q9H1V8 727 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 PDCL3Q9H2J4 239 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 RRN3Q9NYV6 651 aa10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 AJAP1Q9UKB5 411 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-228ENST00000557033 MEGF11A6BM72 1044 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 HMGB1P1B2RPK0 211 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 H0Y626 953 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 GOLGA6L22H0YM25 854 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 LUC7L3O95232 432 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 KCNK5O95279 499 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 MOCS3O95396 460 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 TPM2P07951 284 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 SRPRAP08240 638 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 SYPP08247 313 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 UCHL3P15374 230 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 CYP11B1P15538 503 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 ENGP17813 658 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 CSRP1P21291 193 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 ABCB4P21439 1286 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 TACR2P21452 398 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 CDH5P33151 784 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 LSSP48449 732 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 OXCT1P55809 520 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 ST8SIA6P61647 398 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 RPS24P62847 133 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 GFPT1Q06210 699 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 CDH18Q13634 790 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 HSP90AA4PQ58FG1 418 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 OR6B2Q6IFH4 312 aa10.11□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC26A9Q7LBE3 791 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms