RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TSPAN8P19075 237 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 KCNA5P22460 613 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ADSLP30566 484 aaPredicted RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 EMP3P54852 163 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ADARP55265 1226 aaKnown RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 RAB10P61026 200 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 PRAMEP78395 509 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 KLC3Q6P597 504 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 CLEC20AQ6ZU45 233 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 PDZD4Q76G19 769 aaPredicted RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 OR9I1Q8NGQ6 314 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 ZNF597Q96LX8 424 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ATXN3LQ9H3M9 355 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 DDIT4Q9NX09 232 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 DERAQ9Y315 318 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 CSADQ9Y600 493 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ATP6AP2A0A1C7CYW4 349 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ATP6AP2O75787 350 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRP54-213ENST00000556994 TAS2R39P59534 338 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 RHDQ02161 417 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 SULT2A1Q06520 285 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 LRP8Q14114 963 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 FASTKQ14296 549 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 FRG1Q14331 258 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 CSHL1Q14406 222 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 REP15Q6BDI9 236 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ALKAL1Q6UXT8 129 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 MOB2Q70IA6 237 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 GPRIN1Q7Z2K8 1008 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 IPMKQ8NFU5 416 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 TNIP3Q96KP6 325 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 KIFC1Q9BW19 673 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 OLAHQ9NV23 265 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 TRPC5OSA6NMA1 111 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ERI2A8K979 691 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 BTBD19C9JJ37 291 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 DFFAO00273 331 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 H6PDO95479 791 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 YWHAQP27348 245 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 HADHAP40939 763 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 SLC1A2P43004 574 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 HK2P52789 917 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 SEMA3BQ13214 749 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ITPRIPL1Q6GPH6 555 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 TAPT1Q6NXT6 567 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 MAMDC4Q6UXC1 1216 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 LPCAT2Q7L5N7 544 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 RIN3Q8TB24 985 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 PHF21BQ96EK2 531 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 HSPBAP1Q96EW2 488 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 MAELQ96JY0 434 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 MRPL46Q9H2W6 279 aaKnown RBP11.51□□□□□ -0.57
SRP54-213ENST00000556994 TIMMDC1Q9NPL8 285 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 OR12D3Q9UGF7 316 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 SFMBT1Q9UHJ3 866 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 FBXW11Q9UKB1 542 aa11.51□□□□□ -0.57
SRP54-213ENST00000556994 ZSWIM8A7E2V4 1837 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 SBF1O95248 1867 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 HEATR9A2RTY3 570 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 PSMD12O00232 456 aaPredicted RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 UBDO15205 165 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 LRIG2O94898 1065 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 C8BP07358 591 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 HSPA1AP0DMV8 641 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 HSPA1BP0DMV9 641 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 CYP2C9P11712 490 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 ZNF23P17027 643 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 ARNTP27540 789 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 STT3AP46977 705 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 TAF6P49848 677 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 PRKAA2P54646 552 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 NME5P56597 212 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 TXNL4AP83876 142 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 CREB5Q02930 508 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 DCTN2Q13561 401 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 RBM20Q5T481 1227 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 NAPEPLDQ6IQ20 393 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 BORAQ6PGQ7 559 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 CARM1Q86X55 608 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms