RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GDPD4Q6W3E5 623 aa23.17■■□□□ 1.3
TDP1-216ENST00000556867 LRRC49Q8IUZ0 686 aa23.17■■□□□ 1.3
TDP1-216ENST00000556867 ATPAF2Q8N5M1 289 aa23.17■■□□□ 1.3
TDP1-216ENST00000556867 TSEN2Q8NCE0 465 aaKnown RBP23.17■■□□□ 1.3
TDP1-216ENST00000556867 CINPQ9BW66 212 aaPredicted RBP23.17■■□□□ 1.3
TDP1-216ENST00000556867 REXO2Q9Y3B8 237 aaKnown RBP23.17■■□□□ 1.3
TDP1-216ENST00000556867 DNAH14Q0VDD8 3507 aa23.17■■□□□ 1.3
TDP1-216ENST00000556867 TRPM6Q9BX84 2022 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 LRRD1A4D1F6 860 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 C16orf96A6NNT2 1141 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 TM4SF5O14894 197 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 INSIG1O15503 277 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 AP1G1O43747 822 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 SPOPO43791 374 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 RNGTTO60942 597 aaKnown RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 PEX11BO96011 259 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 ATXN3P54252 364 aaPredicted RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 BNC1Q01954 994 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 LBRQ14739 615 aaKnown RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 GRM3Q14832 879 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 TEAD4Q15561 434 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 PRPF39Q86UA1 669 aaKnown RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 RHOT1Q8IXI2 618 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 PQLC3Q8N755 202 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 RAB7BQ96AH8 199 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 SLC6A18Q96N87 628 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 KLHL32Q96NJ5 620 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 PSKH2Q96QS6 385 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 GTPBP2Q9BX10 602 aaKnown RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 DKK3Q9UBP4 350 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 SEPT3Q9UH03 358 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 DMTF1Q9Y222 760 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 HYOU1Q9Y4L1 999 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 FADS3Q9Y5Q0 445 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 TP53BP1Q12888 1972 aaPredicted RBP23.16■■□□□ 1.3
TDP1-216ENST00000556867 ANKRD36A6QL64 1941 aa23.16■■□□□ 1.3
TDP1-216ENST00000556867 RCCD1A6NED2 376 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 C3orf70A6NLC5 250 aaPredicted RBP23.15■■□□□ 1.3
TDP1-216ENST00000556867 GOLGA6L6A8MZA4 724 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 RGRP47804 291 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 CSNK1EP49674 416 aaKnown RBP23.15■■□□□ 1.3
TDP1-216ENST00000556867 NSUN2Q08J23 767 aaKnown RBP eCLIP23.15■■□□□ 1.3
TDP1-216ENST00000556867 GALNT2Q10471 571 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 C11orf63Q6NUN7 778 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 HORMAD1Q86X24 394 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 MINDY1Q8N5J2 469 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 RNF157Q96PX1 679 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 TUBGCP5Q96RT8 1024 aa23.15■■□□□ 1.3
TDP1-216ENST00000556867 DDX56Q9NY93 547 aaKnown RBP23.15■■□□□ 1.3
TDP1-216ENST00000556867 A0A1B0GVT2 93 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 A0A1W2PQU0 124 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 BTNL10A8MVZ5 291 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 PSTPIP1O43586 416 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 KRT1P04264 644 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 MAT2AP31153 395 aaKnown RBP23.14■■□□□ 1.29
TDP1-216ENST00000556867 HSPA9P38646 679 aaKnown RBP23.14■■□□□ 1.29
TDP1-216ENST00000556867 ABL2P42684 1182 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 RENBPP51606 427 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 SLC10A7Q0GE19 358 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 SETMARQ53H47 684 aaPredicted RBP23.14■■□□□ 1.29
TDP1-216ENST00000556867 NAPEPLDQ6IQ20 393 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 IL27RAQ6UWB1 636 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 SRLQ86TD4 932 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 ACRBPQ8NEB7 543 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 SERAC1Q96JX3 654 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 CALR3Q96L12 384 aaKnown RBP23.14■■□□□ 1.29
TDP1-216ENST00000556867 DNAAF2Q9NVR5 837 aaKnown RBP23.14■■□□□ 1.29
TDP1-216ENST00000556867 SALL4Q9UJQ4 1053 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 ALG6Q9Y672 507 aa23.14■■□□□ 1.29
TDP1-216ENST00000556867 TSPAN11A1L157 253 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 MUSKO15146 869 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 VILLO15195 856 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 PCDH8O95206 1070 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 PIGNO95427 931 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 GARSP41250 739 aaKnown RBP23.13■■□□□ 1.29
TDP1-216ENST00000556867 VAV2P52735 878 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 ZNF235Q14590 738 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 ZNF284Q2VY69 593 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 TMEM259Q4ZIN3 620 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 KIAA1161Q6NSJ0 714 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 LAYNQ6UX15 382 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 DGLUCYQ7Z3D6 616 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 ZSCAN30Q86W11 494 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 OR2I1PQ8NGU4 316 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 HCAR2Q8TDS4 363 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 ZNF641Q96N77 438 aaPredicted RBP23.13■■□□□ 1.29
TDP1-216ENST00000556867 GOLPH3Q9H4A6 298 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 AASDHPPTQ9NRN7 309 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 ZFR2Q9UPR6 939 aaKnown RBP23.13■■□□□ 1.29
TDP1-216ENST00000556867 ANKRD6Q9Y2G4 727 aa23.13■■□□□ 1.29
TDP1-216ENST00000556867 CABIN1Q9Y6J0 2220 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 A0A1W2PR77 199 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 DCDC2BA2VCK2 349 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 PJA2O43164 708 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 SPINT1O43278 529 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 TSPAN6O43657 245 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 GJB3O75712 270 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 GSDMDP57764 484 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 AP1S1P61966 158 aa23.12■■□□□ 1.29
TDP1-216ENST00000556867 GBE1Q04446 702 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms