RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 RBM41Q96IZ5 413 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 ZNF641Q96N77 438 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 TSGA13Q96PP4 275 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 ZDHHC5Q9C0B5 715 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 KLHL11Q9NVR0 708 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 DKK3Q9UBP4 350 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 AMACRQ9UHK6 382 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
MTHFD1-214ENST00000556771 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3DA0A087WVF3 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3IA0A087WXS9 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3EA0A087X179 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3KA0A087X1G2 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 A0A1W2PPC4 97 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 A0A1W2PQ67 120 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 CCDC66A2RUB6 948 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3FA6NER0 549 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 FAM47DPA6NHR8 397 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3LB9A6J9 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 APOL1O14791 398 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 BCAT2O15382 392 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 SYPP08247 313 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3HP0C7X1 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ADRB3P13945 408 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 CCNCP24863 283 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 CETN2P41208 172 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 AFF3P51826 1226 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 METAP1P53582 386 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 AP1S1P61966 158 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 HNRNPDQ14103 355 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 SF3A2Q15428 464 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TEAD4Q15561 434 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 POM121L1PQ3SYA9 428 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TFDP3Q5H9I0 405 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ATXN7L2Q5T6C5 722 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 MARC1Q5VT66 337 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3GQ6DHY5 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3CQ6IPX1 549 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 BRAT1Q6PJG6 821 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 GDPD4Q6W3E5 623 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ARHGAP36Q6ZRI8 547 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 PRPF39Q86UA1 669 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 RCOR2Q8IZ40 523 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TBC1D3Q8IZP1 549 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 OR6K2Q8NGY2 324 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 EXD1Q8NHP7 514 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 SNX19Q92543 992 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ANP32BQ92688 251 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ARRDC3Q96B67 414 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 BRD8Q9H0E9 1235 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 MIR1-1HGQ9H1L0 117 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 ATP13A3Q9H7F0 1226 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 CAPN10Q9HC96 672 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 TMEM74BQ9NUR3 256 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 EIF2B4Q9UI10 523 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 SALL4Q9UJQ4 1053 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 HYOU1Q9Y4L1 999 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 CACNA1EQ15878 2313 aa10.7□□□□□ -0.7
MTHFD1-214ENST00000556771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 LNP1A1A4G5 178 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 TSPAN11A1L157 253 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 C16orf96A6NNT2 1141 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 PPP1R12AO14974 1030 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 MATN3O15232 486 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 TSPAN6O43657 245 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 KRT86O43790 486 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 RNGTTO60942 597 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 PEX11BO96011 259 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CFIP05156 583 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 UGT2B4P06133 528 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 TNNT1P13805 278 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CES1P23141 567 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CTNNA2P26232 953 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 SERPINA4P29622 427 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CTNNA1P35221 906 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CDKN2BP42772 138 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 MMP13P45452 471 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 GRIA4P48058 902 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 NR2C2P49116 596 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 TAS2R38P59533 333 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 COPS2P61201 443 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 RACK1P63244 317 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 IRX4P78413 519 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CCDC6Q16204 474 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 PPP2R5EQ16537 467 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 TAZQ16635 292 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 SETMARQ53H47 684 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 CFAP58Q5T655 872 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 KIAA1161Q6NSJ0 714 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 SPOCD1Q6ZMY3 1216 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 ZNF662Q6ZS27 426 aa10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 PARS2Q7L3T8 475 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-214ENST00000556771 SRLQ86TD4 932 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms