RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DCUN1D2Q6PH85 259 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 GDPD4Q6W3E5 623 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 TTC7BQ86TV6 843 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 CACTIN-AS1Q8N1I8 211 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 NETO2Q8NC67 525 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 RFFLQ8WZ73 363 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 VOPP1Q96AW1 172 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 GDAP1L1Q96MZ0 367 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 KLF6Q99612 283 aaPredicted RBP22.93■■□□□ 1.26
ACTN1-220ENST00000556433 NRSN2Q9GZP1 204 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 KLC2Q9H0B6 622 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 GPR27Q9NS67 375 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 GGT7Q9UJ14 662 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 CLCA2Q9UQC9 943 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 SPTY2D1-AS1A0A0U1RR47 76 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 SCAMP1O15126 338 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 TNFAIP3P21580 790 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 YBEYP58557 167 aaPredicted RBP22.92■■□□□ 1.26
ACTN1-220ENST00000556433 HNRNPKP61978 463 aaKnown RBP eCLIP22.92■■□□□ 1.26
ACTN1-220ENST00000556433 SEMG2Q02383 582 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 PPP1R15BQ5SWA1 713 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 CCDC183Q5T5S1 534 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 MCOLN2Q8IZK6 566 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 CASKIN2Q8WXE0 1202 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 ASB12Q8WXK4 309 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 ARHGEF26Q96DR7 871 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 HMCESQ96FZ2 354 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 EPAS1Q99814 870 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 TTYH3Q9C0H2 523 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 CATSPERBQ9H7T0 1116 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 NLGN3Q9NZ94 848 aa22.92■■□□□ 1.26
ACTN1-220ENST00000556433 CHD5Q8TDI0 1954 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 A0A087WV48 116 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 RASA4BC9J798 803 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 RASA4O43374 803 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 NEBLO76041 1014 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 IGSF6O95976 241 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 MT-CO3P00414 261 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 CSF2P04141 144 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 CKMT1AP12532 417 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 MYF5P13349 255 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 ATP1A3P13637 1013 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 AIF1P55008 147 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 RHOAP61586 193 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 PDE1CQ14123 709 aaPredicted RBP22.91■■□□□ 1.26
ACTN1-220ENST00000556433 RTP5Q14D33 572 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 INO80DQ53TQ3 878 aaPredicted RBP22.91■■□□□ 1.26
ACTN1-220ENST00000556433 IRF2BP2Q7Z5L9 587 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 AOPEPQ8N6M6 819 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 BAP1Q92560 729 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 APOLD1Q96LR9 279 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 DCBLD2Q96PD2 775 aa22.91■■□□□ 1.26
ACTN1-220ENST00000556433 LAMA5O15230 3695 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 WASH4PA8MWX3 477 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 K7ESM1 405 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 AREL1O15033 823 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 SPINT1O43278 529 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 NME1P15531 152 aaKnown RBP22.9■■□□□ 1.26
ACTN1-220ENST00000556433 DESP17661 470 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 SERINC3Q13530 473 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 PARP15Q460N3 678 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 LRRC73Q5JTD7 316 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 PARGQ86W56 976 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 DCBLD1Q8N8Z6 715 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 DUSP23Q9BVJ7 150 aa22.9■■□□□ 1.26
ACTN1-220ENST00000556433 H3BM21 787 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TEX33O43247 280 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 MMP20O60882 483 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 MBD3O95983 291 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TIMP2P16035 220 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 ITIH2P19823 946 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 PFN3P60673 137 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 OGDHQ02218 1023 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TYRO3Q06418 890 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TPRG1LQ5T0D9 272 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 KDM7AQ6ZMT4 941 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 UMODL1-AS1Q8N2C9 162 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 FAM181AQ8N9Y4 354 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 DENND6BQ8NEG7 585 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 ZNF548Q8NEK5 533 aaPredicted RBP22.89■■□□□ 1.25
ACTN1-220ENST00000556433 CENPTQ96BT3 561 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TAS2R14Q9NYV8 317 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 KLF15Q9UIH9 416 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 MFHAS1Q9Y4C4 1052 aa22.89■■□□□ 1.25
ACTN1-220ENST00000556433 TMCO5BA8MYB1 307 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 INSIG1O15503 277 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 FGF10O15520 208 aaPredicted RBP22.88■■□□□ 1.25
ACTN1-220ENST00000556433 JUNDP17535 347 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 DUSP3P51452 185 aaPredicted RBP22.88■■□□□ 1.25
ACTN1-220ENST00000556433 CYTH1Q15438 398 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 VPS36Q86VN1 386 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 CXorf40AQ8TE69 158 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 VCPIP1Q96JH7 1222 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 NAT10Q9H0A0 1025 aaKnown RBP22.88■■□□□ 1.25
ACTN1-220ENST00000556433 EVA1BQ9NVM1 165 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 GPATCH2LQ9NWQ4 482 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 DKK3Q9UBP4 350 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 CSNK1G3Q9Y6M4 447 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 ASXL3Q9C0F0 2248 aa22.88■■□□□ 1.25
ACTN1-220ENST00000556433 MYLKQ15746 1914 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms