RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 USP7Q93009 1102 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CCDC34Q96HJ3 373 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 TBATAQ96M53 351 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 FUCA2Q9BTY2 467 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 C1QTNF7Q9BXJ2 289 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 TM6SF2Q9BZW4 377 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CEP44Q9C0F1 390 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 LRRN3Q9H3W5 708 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 PNMA8BQ9ULN7 279 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 FCF1Q9Y324 198 aaKnown RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 SNX10Q9Y5X0 201 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 A0A1W2PQM1 296 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 TRIM49BA6NDI0 452 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 C16orf96A6NNT2 1141 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 GLI1P08151 1106 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 EIF4A3P38919 411 aaKnown RBP14.15□□□□□ -0.14
ACTN1-219ENST00000556432 PMS1P54277 932 aaKnown RBP14.15□□□□□ -0.14
ACTN1-219ENST00000556432 YPEL5P62699 121 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 MORC3Q14149 939 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 EFHC1Q5JVL4 640 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 PHF19Q5T6S3 580 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 BORAQ6PGQ7 559 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 CCNJLQ8IV13 435 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 OR6K2Q8NGY2 324 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 ASB12Q8WXK4 309 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 RAB7BQ96AH8 199 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 ARHGEF26Q96DR7 871 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 CMKLR1Q99788 373 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
ACTN1-219ENST00000556432 ADNPQ9H2P0 1102 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 ATP13A1Q9HD20 1204 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 RMND1Q9NWS8 449 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 MPP6Q9NZW5 540 aa14.15□□□□□ -0.14
ACTN1-219ENST00000556432 HECAQ9UBI9 543 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-219ENST00000556432 KRIT1O00522 736 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF821O75541 412 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-219ENST00000556432 GNA15P30679 374 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 GKP32189 559 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 ETV5P41161 510 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 FOXK1P85037 733 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 LRRC63Q05C16 580 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
ACTN1-219ENST00000556432 KCNAB2Q13303 367 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 PKP1Q13835 747 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 MEA1Q16626 185 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 C5orf22Q49AR2 442 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 LRRC73Q5JTD7 316 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 TMEM164Q5U3C3 297 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 GKN2Q86XP6 184 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 OR6C4Q8NGE1 309 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 TSACCQ96A04 125 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-219ENST00000556432 TMEM159Q96B96 161 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 CENPTQ96BT3 561 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 KREMEN1Q96MU8 473 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 TKTL2Q9H0I9 626 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 WDCPQ9H6R7 721 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 ASNSD1Q9NWL6 643 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 AKAP7Q9P0M2 348 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-219ENST00000556432 MAN2B2Q9Y2E5 1009 aa14.14□□□□□ -0.15
ACTN1-219ENST00000556432 A0A1W2PQ27 194 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 A0A1W2PQ64 194 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 MMP20O60882 483 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 DAB1O75553 588 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 RASGRP1O95267 797 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 UGT2B4P06133 528 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 CD82P27701 267 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 USP8P40818 1118 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 ATP1A2P50993 1020 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 HK3P52790 923 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 POLE2P56282 527 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 SLC20A2Q08357 652 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 PNOCQ13519 176 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 SERINC3Q13530 473 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 NCAPHQ15003 741 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF805Q5CZA5 627 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-219ENST00000556432 FAM183BPQ6ZVS7 135 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 PASD1Q8IV76 773 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 CPXM1Q96SM3 734 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 EPAS1Q99814 870 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 EDEM3Q9BZQ6 932 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 ACP6Q9NPH0 428 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 PIGVQ9NUD9 493 aa14.13□□□□□ -0.15
ACTN1-219ENST00000556432 SPTBN1Q01082 2364 aaKnown RBP14.13□□□□□ -0.15
ACTN1-219ENST00000556432 ZFC3H1O60293 1989 aaKnown RBP14.13□□□□□ -0.15
ACTN1-219ENST00000556432 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 C9orf172C9J069 976 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 TM7SF2O76062 418 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF202O95125 648 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 HTR1BP28222 390 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 SULT1E1P49888 294 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ARHGEF7Q14155 803 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms