RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 WBP2Q969T9 261 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 SKA1Q96BD8 255 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 HVCN1Q96D96 273 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 MED8Q96G25 268 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 CNDP2Q96KP4 475 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 KCNJ15Q99712 375 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 BDH2Q9BUT1 245 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 JAM3Q9BX67 310 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ELOVL4Q9GZR5 314 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 SNX25Q9H3E2 840 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TM9SF3Q9HD45 589 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 IL37Q9NZH6 218 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 FBLN5Q9UBX5 448 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 LSM7Q9UK45 103 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TNPO3Q9Y5L0 923 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 CELSR3Q9NYQ7 3312 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 NUP205Q92621 2012 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 EML5Q05BV3 1969 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 MAST4O15021 2626 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 NUP210Q8TEM1 1887 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 PCDH15Q96QU1 1955 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 VILLO15195 856 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 YKT6O15498 198 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 BRINP1O60477 761 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 TACC1O75410 805 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 IRF1P10914 325 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 UBA7P41226 1012 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 COPAP53621 1224 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CACNA2D1P54289 1103 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 BCAT1P54687 386 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CDH8P55286 799 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 C21orf59P57076 290 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 PRR5P85299 388 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 E2F1Q01094 437 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ZBTB16Q05516 673 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SLC9A5Q14940 896 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SURF1Q15526 300 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 EMC4Q5J8M3 183 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ZCCHC8Q6NZY4 707 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CNNM4Q6P4Q7 775 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 FAM124AQ86V42 546 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 PPM1KQ8N3J5 372 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 FAM184AQ8NB25 1140 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 OR6B3Q8NGW1 331 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 OR2T3Q8NH03 318 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 PHOSPHO1Q8TCT1 267 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SAP25Q8TEE9 199 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SNRNP27Q8WVK2 155 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ANKRD36BP1Q96IX9 119 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 AK8Q96MA6 479 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF578Q96N58 590 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 LGMNQ99538 433 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 MRPL45Q9BRJ2 306 aaKnown RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ANP32EQ9BTT0 268 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ACE2Q9BYF1 805 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SEMA4CQ9C0C4 833 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF518BQ9C0D4 1074 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 BTBD1Q9H0C5 482 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 C6orf106Q9H6K1 298 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SLC6A20Q9NP91 592 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CATSPERZQ9NTU4 200 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 INTS13Q9NVM9 706 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ELOVL2Q9NXB9 296 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 RBAKQ9NYW8 714 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-239ENST00000556315 IL17BQ9UHF5 180 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SIX4Q9UIU6 781 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF510Q9Y2H8 683 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 SLCO1B1Q9Y6L6 691 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 PMF1-BGLAPU3KQ54 211 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 ARID2Q68CP9 1835 aa5.06□□□□□ -1.6
ATXN3-239ENST00000556315 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PTPRJQ12913 1337 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 A0A1B0GTL3 188 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms