RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CXCR3P49682 368 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 GATMP50440 423 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 ARL4CP56559 192 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 RPL10AP62906 217 aaKnown RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 KCTD19Q17RG1 926 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 C2orf27AQ580R0 203 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 SLC45A4Q5BKX6 768 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 TTMPQ5BVD1 217 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 BRMS1LQ5PSV4 323 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 KCTD16Q68DU8 428 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 FUT10Q6P4F1 479 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 GK5Q6ZS86 529 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 GPRIN1Q7Z2K8 1008 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 PRUNE1Q86TP1 453 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 CMTR2Q8IYT2 770 aaKnown RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 NUP93Q8N1F7 819 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 OR2W6PQ8NHA6 318 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 SPPL2BQ8TCT7 592 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 THAP3Q8WTV1 239 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 BHMTQ93088 406 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 CDCA3Q99618 268 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 TTPALQ9BTX7 342 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 RHOBTB2Q9BYZ6 727 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 KLC2Q9H0B6 622 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 BRD8Q9H0E9 1235 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 ADAM7Q9H2U9 754 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 CLEC4MQ9H2X3 399 aaPredicted RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 SAYSD1Q9NPB0 183 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 TMEM30AQ9NV96 361 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 COMMD8Q9NX08 183 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 XPO7Q9UIA9 1087 aaKnown RBP6.98□□□□□ -1.29
SLIRP-204ENST00000555890 RAD54BQ9Y620 910 aa6.98□□□□□ -1.29
SLIRP-204ENST00000555890 A0A087WUV0 522 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TEX51A0A1B0GUA7 166 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 HIDE1A8MVS5 230 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 H0Y626 953 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 RASGRF2O14827 1237 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ALOX15BO15296 676 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 CHADO15335 359 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TP73O15350 636 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 NCAM2O15394 837 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 RGS16O15492 202 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 CREB3O43889 395 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 GCATO75600 419 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TRIM16O95361 564 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ABHD2P08910 425 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 OR4Q2P0C623 313 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF806P0C7X5 589 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SLC2A3P11169 496 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SNRPBP14678 240 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 YWHAQP27348 245 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 RBL1P28749 1068 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 HTR7P34969 479 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PHBP35232 272 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SLC5A3P53794 718 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ARPP19P56211 112 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TPI1P60174 286 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PITX1P78337 314 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 BASP1P80723 227 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 GBE1Q04446 702 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 CLCQ05315 142 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 GPR17Q13304 367 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SQSTM1Q13501 440 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SEPT6Q14141 434 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 STAT4Q14765 748 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PAFAH1B3Q15102 231 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PDK1Q15118 436 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 KYNUQ16719 465 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.295e-7■■■■□ 21.9
SLIRP-204ENST00000555890 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SPOUT1Q5T280 376 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 OTUD1Q5VV17 481 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 HEATR6Q6AI08 1181 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PCSK4Q6UW60 755 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 KDM7AQ6ZMT4 941 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 RFX8Q6ZV50 586 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 BHLHA9Q7RTU4 235 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 DENND4AQ7Z401 1863 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 MON1AQ86VX9 555 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 LSRQ86X29 649 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PDIK1LQ8N165 341 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PYROXD2Q8N2H3 581 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SYNPOQ8N3V7 929 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TDRD5Q8NAT2 981 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 GLIS1Q8NBF1 620 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 MDM1Q8TC05 714 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 DQX1Q8TE96 717 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TFB1MQ8WVM0 346 aaKnown RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PRCCQ92733 491 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 RTP4Q96DX8 246 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PGM2Q96G03 612 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 CEP295NLQ96MC4 621 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SERPINB12Q96P63 405 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 QKIQ96PU8 341 aaKnown RBP eCLIP6.97□□□□□ -1.29
SLIRP-204ENST00000555890 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TKTL2Q9H0I9 626 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 TNKS2Q9H2K2 1166 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms