RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CCL23P55773 120 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 DLG1Q12959 904 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 RCN2Q14257 317 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 UGP2Q16851 508 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF789Q5FWF6 425 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 SPATA6LQ8N4H0 392 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 TEX9Q8N6V9 391 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF781Q8N8C0 355 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 UBE2OQ9C0C9 1292 aaKnown RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 COMMD8Q9NX08 183 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 FBXO5Q9UKT4 447 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 B2RBV5 119 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 MUSKO15146 869 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 ENTPD5O75356 428 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 IL10RBQ08334 325 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 SMARCB1Q12824 385 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 SLC12A1Q13621 1099 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 SNX30Q5VWJ9 437 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 NEPROQ6NW34 567 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 GPR78Q96P69 363 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 VN1R3Q9BXE9 311 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 PRKD2Q9BZL6 878 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 VPS45Q9NRW7 570 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 DONSONQ9NYP3 566 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 ATP5BP06576 529 aaKnown RBP24.53■■□□□ 1.52
TMEM260-207ENST00000555497 SLC6A4P31645 630 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 TAS2R39P59534 338 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 KDSRQ06136 332 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 TNK2Q07912 1038 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 TSTD2Q5T7W7 516 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 CNSTQ6PJW8 725 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 ZYG11AQ6WRX3 759 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 TTLL2Q9BWV7 592 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 MRPL9Q9BYD2 267 aaKnown RBP24.53■■□□□ 1.52
TMEM260-207ENST00000555497 EBF2Q9HAK2 575 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 DNAJC28Q9NX36 388 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 TAGLN3Q9UI15 199 aa24.53■■□□□ 1.52
TMEM260-207ENST00000555497 HEATR9A2RTY3 570 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 TARM1B6A8C7 271 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 ANP32DO95626 131 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 PAMP19021 973 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 CCR10P46092 362 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 RAB10P61026 200 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 SIRPB2Q5JXA9 342 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 WASHC2DQ5SRD0 308 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 LGI2Q8N0V4 545 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 FSTL5Q8N475 847 aaPredicted RBP24.52■■□□□ 1.52
TMEM260-207ENST00000555497 OR13J1Q8NGT2 312 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 NXNL1Q96CM4 212 aa24.52■■□□□ 1.52
TMEM260-207ENST00000555497 UNKQ9C0B0 810 aaKnown RBP24.52■■□□□ 1.52
TMEM260-207ENST00000555497 STN1Q9H668 368 aaKnown RBP24.52■■□□□ 1.52
TMEM260-207ENST00000555497 UXTQ9UBK9 157 aaPredicted RBP24.52■■□□□ 1.52
TMEM260-207ENST00000555497 HOXA2O43364 376 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 FKTNO75072 461 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 HSPA4LO95757 839 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 PARP15Q460N3 678 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 RBM20Q5T481 1227 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 RBM15BQ8NDT2 890 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 OR52K2Q8NGK3 314 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 C2orf15Q8WU43 125 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 STYXQ8WUJ0 223 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 ELMO2Q96JJ3 720 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 SCYL1Q96KG9 808 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 RANBP9Q96S59 729 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 APOBEC2Q9Y235 224 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 ACOT9Q9Y305 439 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 ACTL7AQ9Y615 435 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 CHD5Q8TDI0 1954 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 CCL22O00626 93 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 GJB5O95377 273 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 EFEMP2O95967 443 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 CHRNGP07510 517 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 ATXN1LP0C7T5 689 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 OR1D2P34982 312 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 MAP2K2P36507 400 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 CD151P48509 253 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 LBRQ14739 615 aaKnown RBP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 GPATCH11Q8N954 259 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 FAM167BQ9BTA0 163 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 RNPEPL1Q9HAU8 725 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.51■■□□□ 1.51
TMEM260-207ENST00000555497 KCTD3Q9Y597 815 aa24.51■■□□□ 1.51
TMEM260-207ENST00000555497 A0A0D9SEW6 157 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 TMEM114B3SHH9 223 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 PRAMEF11O60813 436 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 UPP2O95045 317 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 STMN1P16949 149 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 LRRC8EQ6NSJ5 796 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.5■■□□□ 1.51
TMEM260-207ENST00000555497 MAPK15Q8TD08 544 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 NSMCE1Q8WV22 266 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 CDH19Q9H159 772 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 APOA4P06727 396 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 EZRP15311 586 aaKnown RBP24.5■■□□□ 1.51
TMEM260-207ENST00000555497 AOC1P19801 751 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 MAPKAPK2P49137 400 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 ARSDP51689 593 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 SLC8B1Q6J4K2 584 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 DEFB128Q7Z7B8 93 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 AGR3Q8TD06 166 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms