RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PCDH19Q8TAB3 1148 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 MRGPRX3Q96LB0 322 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SLC39A8Q9C0K1 460 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 NOL6Q9H6R4 1146 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DDX56Q9NY93 547 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SPAG17Q6Q759 2223 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 WDR87Q6ZQQ6 2873 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 MUC22E2RYF6 1773 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 DCLK1O15075 740 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 RIPK2O43353 540 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 SMAD6O43541 496 aaKnown RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 KRT10P13645 584 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 IL4RP24394 825 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 HTR7P34969 479 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ETFBP38117 255 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 FNTBP49356 437 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ARSEP51690 589 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 PLK1P53350 603 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 MAGOHP61326 146 aaKnown RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ARF5P84085 180 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 SULT2A1Q06520 285 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 DLG2Q15700 870 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 TNFAIP8L3Q5GJ75 292 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 MFSD7Q6UXD7 560 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ARHGAP36Q6ZRI8 547 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 RELL1Q8IUW5 271 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 MAML2Q8IZL2 1156 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 RYBPQ8N488 228 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 DCAF4L2Q8NA75 395 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 HAUS1Q96CS2 278 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 CCT8L2Q96SF2 557 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 HEMGNQ9BXL5 484 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 OSBPL8Q9BZF1 889 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 MAGEH1Q9H213 219 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 FAM86C1Q9NVL1 165 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 ASIC3Q9UHC3 531 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 FCF1Q9Y324 198 aaKnown RBP10.03□□□□□ -0.8
PSEN1-213ENST00000555386 NEU2Q9Y3R4 380 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 HEY1Q9Y5J3 304 aa10.03□□□□□ -0.8
PSEN1-213ENST00000555386 THADAQ6YHU6 1953 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ANKRD36A6QL64 1941 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 A0A087WUV0 522 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 A0A1W2PQF6 199 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 GMNCA6NCL1 334 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ARHGAP42A6NI28 874 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 WASH4PA8MWX3 477 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 J3KR12 359 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 K7ESF4 209 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 RGS16O15492 202 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 MFSD11O43934 449 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SIN3BO75182 1162 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 TCEA3O75764 348 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ALDH1A2O94788 518 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 APBB3O95704 486 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SRPRAP08240 638 aaKnown RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SP9P0CG40 484 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 IVDP26440 423 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ATP5DP30049 168 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 MMP13P45452 471 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 KCNJ1P48048 391 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 HCAR3P49019 387 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF135P52742 658 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 NDST2P52849 883 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SERINC3Q13530 473 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 POM121L1PQ3SYA9 428 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 PARP15Q460N3 678 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 HSF5Q4G112 596 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 FAM182AQ5T1J6 154 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 NCBP2-AS2Q69YL0 99 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 TTC19Q6DKK2 380 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 RETSATQ6NUM9 610 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 NPNTQ6UXI9 565 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF783Q6ZMS7 281 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 SPOCD1Q6ZMY3 1216 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 Q6ZVU0 165 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 TAOK1Q7L7X3 1001 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ARHGAP12Q8IWW6 846 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 UMODL1-AS1Q8N2C9 162 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 STK40Q8N2I9 435 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 PRSS33Q8NF86 280 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 OR6K2Q8NGY2 324 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF473Q8WTR7 871 aaKnown RBP10.02□□□□□ -0.81
PSEN1-213ENST00000555386 MYO19Q96H55 970 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 RNF157Q96PX1 679 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF670Q9BS34 389 aa10.02□□□□□ -0.81
PSEN1-213ENST00000555386 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms