RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CYP4V2Q6ZWL3 525 aaPredicted RBP12.01□□□□□ -0.49
VRK1-204ENST00000555351 TMPRSS7Q7RTY8 843 aa12.01□□□□□ -0.49
VRK1-204ENST00000555351 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
VRK1-204ENST00000555351 HMCESQ96FZ2 354 aa12.01□□□□□ -0.49
VRK1-204ENST00000555351 SNRNP25Q9BV90 132 aaKnown RBP12.01□□□□□ -0.49
VRK1-204ENST00000555351 DHX35Q9H5Z1 703 aaKnown RBP12.01□□□□□ -0.49
VRK1-204ENST00000555351 PDFQ9HBH1 243 aa12.01□□□□□ -0.49
VRK1-204ENST00000555351 KLK13Q9UKR3 277 aa12.01□□□□□ -0.49
VRK1-204ENST00000555351 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
VRK1-204ENST00000555351 C1QTNF9BB2RNN3 333 aa12□□□□□ -0.49
VRK1-204ENST00000555351 TOR1BO14657 336 aa12□□□□□ -0.49
VRK1-204ENST00000555351 DAPK3O43293 454 aa12□□□□□ -0.49
VRK1-204ENST00000555351 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
VRK1-204ENST00000555351 C1QTNF9P0C862 333 aa12□□□□□ -0.49
VRK1-204ENST00000555351 THEGLP0DJG4 465 aa12□□□□□ -0.49
VRK1-204ENST00000555351 SKILP12757 684 aa12□□□□□ -0.49
VRK1-204ENST00000555351 SPINK2P20155 84 aa12□□□□□ -0.49
VRK1-204ENST00000555351 RABIFP47224 123 aa12□□□□□ -0.49
VRK1-204ENST00000555351 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
VRK1-204ENST00000555351 ILKQ13418 452 aa12□□□□□ -0.49
VRK1-204ENST00000555351 DPYSL2Q16555 572 aa12□□□□□ -0.49
VRK1-204ENST00000555351 GCNT7Q6ZNI0 430 aa12□□□□□ -0.49
VRK1-204ENST00000555351 ZNF354CQ86Y25 554 aa12□□□□□ -0.49
VRK1-204ENST00000555351 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
VRK1-204ENST00000555351 RYBPQ8N488 228 aaPredicted RBP12□□□□□ -0.49
VRK1-204ENST00000555351 TEKT4Q8WW24 435 aa12□□□□□ -0.49
VRK1-204ENST00000555351 ZNF641Q96N77 438 aaPredicted RBP12□□□□□ -0.49
VRK1-204ENST00000555351 TUBGCP5Q96RT8 1024 aa12□□□□□ -0.49
VRK1-204ENST00000555351 PEBP4Q96S96 227 aa12□□□□□ -0.49
VRK1-204ENST00000555351 C1QTNF7Q9BXJ2 289 aa12□□□□□ -0.49
VRK1-204ENST00000555351 KLC2Q9H0B6 622 aa12□□□□□ -0.49
VRK1-204ENST00000555351 ZWILCHQ9H900 591 aa12□□□□□ -0.49
VRK1-204ENST00000555351 LHX3Q9UBR4 397 aa12□□□□□ -0.49
VRK1-204ENST00000555351 UBA2Q9UBT2 640 aaPredicted RBP12□□□□□ -0.49
VRK1-204ENST00000555351 LCMT1Q9UIC8 334 aa12□□□□□ -0.49
VRK1-204ENST00000555351 ACTL7AQ9Y615 435 aa12□□□□□ -0.49
VRK1-204ENST00000555351 TSPAN11A1L157 253 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 NEMP1O14524 444 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 ENC1O14682 589 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 FPGTO14772 594 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 LDOC1O95751 146 aaPredicted RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 GYPCP04921 128 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 CYP1A2P05177 515 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 UGT2B4P06133 528 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 PRLRP16471 622 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 ERCC2P18074 760 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 ABL2P42684 1182 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 IL9RQ01113 521 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 IL10RBQ08334 325 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 ELP6Q0PNE2 266 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 SGCGQ13326 291 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 DPYSQ14117 519 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 TRIM14Q14142 442 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 CYTH1Q15438 398 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 CA9Q16790 459 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 SEL1L3Q68CR1 1132 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 BRAT1Q6PJG6 821 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 GATAD2AQ86YP4 633 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 TSC1Q92574 1164 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 BMFQ96LC9 184 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 KLHL32Q96NJ5 620 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 ZNF599Q96NL3 588 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 KLF6Q99612 283 aaPredicted RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 TRIM7Q9C029 511 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 GPATCH2LQ9NWQ4 482 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 IFNKQ9P0W0 207 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 RCOR3Q9P2K3 495 aaPredicted RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 PCSK1NQ9UHG2 260 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 IP6K2Q9UHH9 426 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 CABIN1Q9Y6J0 2220 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 MAP1BP46821 2468 aaKnown RBP11.99□□□□□ -0.49
VRK1-204ENST00000555351 USP24Q9UPU5 2620 aa11.99□□□□□ -0.49
VRK1-204ENST00000555351 KNL1Q8NG31 2342 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 PTPRBP23467 1997 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 A0A087X0T9 212 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 SPTY2D1-AS1A0A0U1RR47 76 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 H3BRJ5 948 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 SPINT1O43278 529 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 CBFA2T2O43439 604 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 PAK4O96013 591 aaPredicted RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 CAPNS1P04632 268 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 FAM228BP0C875 321 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 GKP32189 559 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 ARL4AP40617 200 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 PAPOLAP51003 745 aaKnown RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 YPEL5P62699 121 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 BNIP3Q12983 259 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 FGL2Q14314 439 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 AGERQ15109 404 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 PPP6R3Q5H9R7 873 aaPredicted RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 PRAMEF14Q5SWL7 426 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 ATXN7L2Q5T6C5 722 aaPredicted RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 ALKBH5Q6P6C2 394 aaKnown RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 TTC7BQ86TV6 843 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms