RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KCTD11Q693B1 232 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 Q6ZS52 159 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 GJD3Q8N144 294 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 IPMKQ8NFU5 416 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 PTPRN2Q92932 1015 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ACDQ96AP0 544 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ZNF599Q96NL3 588 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 MGME1Q9BQP7 344 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 EVLQ9UI08 416 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 APODP05090 189 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 TUBBP07437 444 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 CHRNA4P43681 627 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 SCNN1BP51168 640 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 MLF2Q15773 248 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 UAP1Q16222 522 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 C22orf39Q6P5X5 142 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 EMBQ6PCB8 327 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 PCGF5Q86SE9 256 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 HOOK3Q86VS8 718 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 RALGPS2Q86X27 583 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 IGDCC3Q8IVU1 814 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 MPP5Q8N3R9 675 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 OR52K1Q8NGK4 314 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 FAM3CQ92520 227 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 IMP4Q96G21 291 aaKnown RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 C9orf72Q96LT7 481 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 PSKH2Q96QS6 385 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 TXLNGYQ9BZA5 131 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 SLC6A17Q9H1V8 727 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ARGLU1Q9NWB6 273 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 MTRF1LQ9UGC7 380 aaKnown RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ADAM23O75077 832 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ERLIN1O75477 346 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 PIGNO95427 931 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 AP2A1O95782 977 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 AGTP01019 485 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CTSLP07711 333 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 TPSB2P20231 275 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 COL9A1P20849 921 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 EIF2DP41214 584 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 SKOR1P84550 965 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 GAS6Q14393 721 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 TPSAB1Q15661 275 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 HIF1AQ16665 826 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 POM121L1PQ3SYA9 428 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 BBS9Q3SYG4 887 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 DENND2CQ68D51 928 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 KIAA1211LQ6NV74 962 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 DPY19L3Q6ZPD9 716 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CAPN12Q6ZSI9 719 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ZSWIM9Q86XI8 627 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SIX5Q8N196 739 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 EIF1ADQ8N9N8 165 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 OR2A12Q8NGT7 310 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 CAVIN3Q969G5 261 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 FICDQ9BVA6 458 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 POLR1EQ9GZS1 481 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 SLC25A51Q9H1U9 297 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 EPB41L4BQ9H329 900 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 TMEM245Q9H330 911 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SEMA4AQ9H3S1 761 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ARFGAP3Q9NP61 516 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 THAP10Q9P2Z0 257 aaPredicted RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 SARDHQ9UL12 918 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 PCDHGC4Q9Y5F7 938 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 PLK4O00444 970 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ATP9BO43861 1147 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SASH3O75995 380 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 PDHA1P08559 390 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SESN2P58004 480 aaPredicted RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 RHOAP61586 193 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 SEMG2Q02383 582 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CAV1Q03135 178 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 PDIA2Q13087 525 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 CCINQ13939 588 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 DMC1Q14565 340 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 MAP9Q49MG5 647 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 FNDC3BQ53EP0 1204 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 INO80DQ53TQ3 878 aaPredicted RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 C4orf22Q6V702 233 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CACUL1Q86Y37 369 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CAMK1DQ8IU85 385 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ZBED8Q8IZ13 594 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 WFIKKN2Q8TEU8 576 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
TDP1-211ENST00000555178 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms