RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 EDF1O60869 148 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 CLASP2O75122 1294 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 PRLP01236 227 aa9□□□□□ -0.97
TDP1-210ENST00000554976 EPOP01588 193 aa9□□□□□ -0.97
TDP1-210ENST00000554976 TCF3P15923 654 aa9□□□□□ -0.97
TDP1-210ENST00000554976 GABRR2P28476 465 aa9□□□□□ -0.97
TDP1-210ENST00000554976 ELF1P32519 619 aa9□□□□□ -0.97
TDP1-210ENST00000554976 CSE1LP55060 971 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 SMAD3P84022 425 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 IL9RQ01113 521 aa9□□□□□ -0.97
TDP1-210ENST00000554976 PDPK2PQ6A1A2 396 aa9□□□□□ -0.97
TDP1-210ENST00000554976 CTAGE3PQ8IX95 158 aa9□□□□□ -0.97
TDP1-210ENST00000554976 TMEM151AQ8N4L1 468 aa9□□□□□ -0.97
TDP1-210ENST00000554976 OTUD6BQ8N6M0 293 aa9□□□□□ -0.97
TDP1-210ENST00000554976 DNAAF3Q8N9W5 541 aa9□□□□□ -0.97
TDP1-210ENST00000554976 POF1BQ8WVV4 589 aa9□□□□□ -0.97
TDP1-210ENST00000554976 PABPC5Q96DU9 382 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
TDP1-210ENST00000554976 TLR9Q9NR96 1032 aa9□□□□□ -0.97
TDP1-210ENST00000554976 FGFR1OP2Q9NVK5 253 aa9□□□□□ -0.97
TDP1-210ENST00000554976 HCFC1R1Q9NWW0 138 aa9□□□□□ -0.97
TDP1-210ENST00000554976 SAMD15Q9P1V8 674 aa9□□□□□ -0.97
TDP1-210ENST00000554976 SIRPGQ9P1W8 387 aa9□□□□□ -0.97
TDP1-210ENST00000554976 STARD13Q9Y3M8 1113 aa9□□□□□ -0.97
TDP1-210ENST00000554976 SOBPA7XYQ1 873 aa9□□□□□ -0.97
TDP1-210ENST00000554976 PMPCBO75439 489 aa9□□□□□ -0.97
TDP1-210ENST00000554976 LUC7L3O95232 432 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 BIRC2Q13490 618 aa9□□□□□ -0.97
TDP1-210ENST00000554976 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
TDP1-210ENST00000554976 ESRP1Q6NXG1 681 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 CASC4Q6P4E1 433 aa9□□□□□ -0.97
TDP1-210ENST00000554976 C2CD4AQ8NCU7 369 aaPredicted RBP9□□□□□ -0.97
TDP1-210ENST00000554976 ZNF75CPQ92670 426 aaPredicted RBP9□□□□□ -0.97
TDP1-210ENST00000554976 GPR22Q99680 433 aa9□□□□□ -0.97
TDP1-210ENST00000554976 POLR1EQ9GZS1 481 aaKnown RBP9□□□□□ -0.97
TDP1-210ENST00000554976 RIMKLBQ9ULI2 386 aa9□□□□□ -0.97
TDP1-210ENST00000554976 ARHGAP26Q9UNA1 814 aa9□□□□□ -0.97
TDP1-210ENST00000554976 RWDD3Q9Y3V2 267 aa9□□□□□ -0.97
TDP1-210ENST00000554976 SLC4A7Q9Y6M7 1214 aa9□□□□□ -0.97
TDP1-210ENST00000554976 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
TDP1-210ENST00000554976 TLL1O43897 1013 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 TSPAN3O60637 253 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZNF821O75541 412 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 MYOGP15173 224 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 CDC25CP30307 473 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 KCNC3Q14003 757 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 POU6F1Q14863 301 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SLC5A9Q2M3M2 681 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 MPP7Q5T2T1 576 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 TSTD2Q5T7W7 516 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 MROH9Q5TGP6 573 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FYB2Q5VWT5 728 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FSTL4Q6MZW2 842 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ATG14Q6ZNE5 492 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZC3HC1Q86WB0 502 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 SPATS2Q86XZ4 545 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 ANKS4BQ8N8V4 417 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 PPHLN1Q8NEY8 458 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 CDKL2Q92772 493 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 NUDCD1Q96RS6 583 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 DDX50Q9BQ39 737 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 EMILIN2Q9BXX0 1053 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZFATQ9P243 1243 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 CLEC4EQ9ULY5 219 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 PLXNA2O75051 1894 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 LEFTY2O00292 366 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 GRM6O15303 877 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FZD6O60353 706 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 RHOCP08134 193 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 MZF1P28698 734 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 CTNNB1P35222 781 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SERPINH1P50454 418 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
TDP1-210ENST00000554976 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 PLPP4Q5VZY2 271 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 RNF219Q5W0B1 726 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 BBS7Q8IWZ6 715 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 DCLK2Q8N568 766 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 HJURPQ8NCD3 748 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 CCT6BQ92526 530 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 PEX13Q92968 403 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FAM210AQ96ND0 272 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FAM111AQ96PZ2 611 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SEMA3CQ99985 751 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FEM1AQ9BSK4 669 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SNX15Q9NRS6 342 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SMPD4Q9NXE4 827 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 CCL26Q9Y258 94 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZNF510Q9Y2H8 683 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 MTO1Q9Y2Z2 717 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 IKBKGQ9Y6K9 419 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 COL4A2P08572 1712 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 A0A1W2PRU2 124 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ANKRD33BA6NCL7 494 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 CCL16O15467 120 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 TBL1XO60907 577 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SNNO75324 88 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 GLUD1P00367 558 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 LRG1P02750 347 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SYN1P17600 705 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms