RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PI15O43692 258 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 AKR1B10O60218 316 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MYL1P05976 194 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 HAPLN1P10915 354 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MYL4P12829 197 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 GLULP15104 373 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 AOC1P19801 751 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 NR4A1P22736 598 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 WARSP23381 471 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ACAT1P24752 427 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 PTGS2P35354 604 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SYKP43405 635 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 CYP2J2P51589 502 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 WNT3AP56704 352 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 STARD6P59095 220 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 GPC5P78333 572 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 RBP5P82980 135 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SMARCB1Q12824 385 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 STK4Q13043 487 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MLF2Q15773 248 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SNRNP35Q16560 246 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 KNOP1Q1ED39 458 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MGAT5BQ3V5L5 792 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SLC39A12Q504Y0 691 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TOR2AQ5JU69 321 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 FAM78AQ5JUQ0 283 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 PRAMEF14Q5SWL7 426 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 STXBP5Q5T5C0 1151 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 CYP4A22Q5TCH4 519 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TANGO2Q6ICL3 276 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 VITQ6UXI7 678 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 HTR3DQ70Z44 454 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TRAPPC11Q7Z392 1133 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DNAJB7Q7Z6W7 309 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 METTL23Q86XA0 190 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 LDLRAD3Q86YD5 345 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 CEP57L1Q8IYX8 460 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ADGRF2Q8IZF7 708 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ELMOD1Q8N336 334 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 AFAP1L2Q8N4X5 818 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 CSGALNACT2Q8N6G5 542 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 FSIP1Q8NA03 581 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 XXYLT1Q8NBI6 393 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 STKLD1Q8NE28 680 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SPPL2BQ8TCT7 592 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 PROKR1Q8TCW9 393 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 NOC3LQ8WTT2 800 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 COG1Q8WTW3 980 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 C2orf15Q8WU43 125 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TSPEARQ8WU66 669 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TMEM174Q8WUU8 243 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF480Q8WV37 535 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 KBTBD7Q8WVZ9 684 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DNASE1L2Q92874 299 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 PSMG2Q969U7 264 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ELSPBP1Q96BH3 223 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ANKRD36BP1Q96IX9 119 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SEPT5Q99719 369 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 PRRX2Q99811 253 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MRPL45Q9BRJ2 306 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 MFSD1Q9H3U5 465 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 TRPV4Q9HBA0 871 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 KIAA1586Q9HCI6 787 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DMRT3Q9NQL9 472 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 EXOC1Q9NV70 894 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DMAC2Q9NW81 257 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 C14orf119Q9NWQ9 140 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DDX43Q9NXZ2 648 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 DLGAP2Q9P1A6 1054 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 CGNQ9P2M7 1197 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 USP25Q9UHP3 1055 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 AGAP1Q9UPQ3 857 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 SNX9Q9Y5X1 595 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF638Q14966 1978 aaKnown RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 RIF1Q5UIP0 2472 aaKnown RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 PTPRZ1P23471 2315 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 GPR179Q6PRD1 2367 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 USP34Q70CQ2 3546 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 MYBPHLA2RUH7 354 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 HEPACAM2A8MVW5 462 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 EXOC3O60645 756 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 HUS1O60921 280 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 ATP2C2O75185 946 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 NOL4O94818 638 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 RHOBTB3O94955 611 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 VNN1O95497 513 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 PRAMEF12O95522 483 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 TNNC2P02585 160 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 NR3C1P04150 777 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 RPN1P04843 607 aaKnown RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 KRT19P08727 400 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 DLATP10515 647 aaKnown RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 HMGA1P17096 107 aaKnown RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 GABRR2P28476 465 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 PTPN7P35236 360 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 VIPR2P41587 438 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 ALDH1A3P47895 512 aa4.41□□□□□ -1.7
VTI1B-203ENST00000554636 TUFMP49411 452 aaKnown RBP4.41□□□□□ -1.7
VTI1B-203ENST00000554636 CASP4P49662 377 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms