RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PRKCGP05129 697 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TYK2P29597 1187 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 AVPR1AP37288 418 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 CPA2P48052 419 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 SGSHP51688 502 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 IRF9Q00978 393 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 CBLBQ13191 982 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 CTBP1Q13363 440 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 CHI3L2Q15782 390 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TAF12Q16514 161 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 SPANXN3Q5MJ09 141 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 DENND5AQ6IQ26 1287 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TMEM135Q86UB9 458 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 DENND6AQ8IWF6 608 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 LZTR1Q8N653 840 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 MRGPRX2Q96LB1 330 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 DCLRE1BQ9H816 532 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 MTRRQ9UBK8 725 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TBX21Q9UL17 535 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 USH1CQ9Y6N9 552 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 CEP290O15078 2479 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 REV3LO60673 3130 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 COCHO43405 550 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 BUD23O43709 281 aaKnown RBP11.83□□□□□ -0.52
SHMT2-212ENST00000554467 KRT36O76013 467 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-212ENST00000554467 DHRS4L1P0CG22 281 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 ZCCHC18P0CG32 403 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 RHOQP17081 205 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 GLDCP23378 1020 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 VHLP40337 213 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TMPRSS15P98073 1019 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 BTG3Q14201 252 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-212ENST00000554467 POLD3Q15054 466 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TEDDM1Q5T9Z0 273 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 N4BP2L1Q5TBK1 243 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-212ENST00000554467 AFMIDQ63HM1 303 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 FSTL4Q6MZW2 842 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 OR7D4Q8NG98 312 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 INPP5DQ92835 1189 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 MOCOSQ96EN8 888 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 DTNBP1Q96EV8 351 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 SPATA17Q96L03 361 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 SPON2Q9BUD6 331 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 IL22Q9GZX6 179 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
SHMT2-212ENST00000554467 RAMP2O60895 175 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 DNAJC6O75061 913 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TBX10O75333 385 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 PIRTP0C851 137 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TACR2P21452 398 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 WNT3AP56704 352 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 CNGA3Q16281 694 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 SLC8B1Q6J4K2 584 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 C16orf59Q7L2K0 433 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 NLRP9Q7RTR0 991 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TMEM169Q96HH4 297 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 EXOC2Q96KP1 924 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 NAT9Q9BTE0 207 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TRPC7Q9HCX4 862 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 STARD13Q9Y3M8 1113 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 MYLKQ15746 1914 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 USP1O94782 785 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 KLKB1P03952 638 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ATP5C1P36542 298 aaKnown RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 SERPINB9P50453 376 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 MPP1Q00013 466 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 BST1Q10588 318 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ZNF460Q14592 562 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ACSBG2Q5FVE4 666 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 MARC1Q5VT66 337 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 NUDCD3Q8IVD9 361 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 PGBD5Q8N414 524 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 SPATA6LQ8N4H0 392 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 FCRL5Q96RD9 977 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 FBXO6Q9NRD1 293 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 SNX15Q9NRS6 342 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TMEM248Q9NWD8 314 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 EMCNQ9ULC0 261 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 AAR2Q9Y312 384 aaKnown RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ZFP37Q9Y6Q3 630 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ZNF840PA6NDX5 716 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 PRRG1O14668 218 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 MUSKO15146 869 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 TROVE2P10155 538 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 HMGA1P17096 107 aaKnown RBP11.82□□□□□ -0.52
SHMT2-212ENST00000554467 GP5P40197 560 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 OCRLQ01968 901 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 LSAMPQ13449 338 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 RCN1Q15293 331 aa11.82□□□□□ -0.52
SHMT2-212ENST00000554467 ACBD5Q5T8D3 534 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms