RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 KIAA1161Q6NSJ0 714 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ARFGAP1Q8N6T3 406 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TMEM145Q8NBT3 493 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 FAM174AQ8TBP5 190 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ADAMTS14Q8WXS8 1223 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 GDAP1L1Q96MZ0 367 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 SNRNP25Q9BV90 132 aaKnown RBP10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TM6SF2Q9BZW4 377 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 LRRC19Q9H756 370 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 AKAP13Q12802 2813 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 A0A1W2PQU0 124 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RASA4BC9J798 803 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 EEF2KO00418 725 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RASA4O43374 803 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 BUB1O43683 1085 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 PRPSAP2O60256 369 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 LRCH4O75427 683 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 TMCC1O94876 653 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 DKK1O94907 266 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 POP4O95707 220 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 GYPCP04921 128 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 PROS1P07225 676 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 FTH1P19P0C7X4 201 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 SKILP12757 684 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 HNRNPA2B1P22626 353 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 MIPP30301 263 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 MAT2AP31153 395 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 AKT2P31751 481 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RXRGP48443 463 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 HCAR3P49019 387 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 DNA2P51530 1060 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RPS21P63220 83 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RAD51Q06609 339 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 STAT4Q14765 748 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 TMEM259Q4ZIN3 620 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZNF805Q5CZA5 627 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 FBXL19Q6PCT2 694 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 CYP4V2Q6ZWL3 525 aaPredicted RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 PARS2Q7L3T8 475 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZNF354CQ86Y25 554 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 RHBDD1Q8TEB9 315 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 HMCESQ96FZ2 354 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 PEBP4Q96S96 227 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 TRIM7Q9C029 511 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 DHX35Q9H5Z1 703 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZDHHC6Q9H6R6 413 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 IFNKQ9P0W0 207 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 LUC7L2Q9Y383 392 aaKnown RBP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 MSRB2Q9Y3D2 182 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 MFHAS1Q9Y4C4 1052 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 FADS3Q9Y5Q0 445 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ACTL7AQ9Y615 435 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
PTCD2P1-201ENST00000554393 TMEM8BA6NDV4 472 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 C16orf96A6NNT2 1141 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 RNF103O00237 685 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 KRIT1O00522 736 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 KCNK3O14649 394 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 TNFSF14O43557 240 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 TSPAN6O43657 245 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 HYAL3O43820 417 aaPredicted RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 PCDH8O95206 1070 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 IGSF6O95976 241 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 EPHA8P29322 1005 aaPredicted RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 HNRNPH3P31942 346 aaKnown RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 RHOAP61586 193 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 GRM3Q14832 879 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 SHBQ15464 509 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 RFX8Q6ZV50 586 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 ABI3BPQ7Z7G0 1075 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 SPATS2Q86XZ4 545 aaKnown RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 DNAAF5Q86Y56 855 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 SAP25Q8TEE9 199 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 ASB12Q8WXK4 309 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 VOPP1Q96AW1 172 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 FEM1CQ96JP0 617 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 KLC2Q9H0B6 622 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 PDFQ9HBH1 243 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 GPATCH2LQ9NWQ4 482 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 PCSK1NQ9UHG2 260 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZFR2Q9UPR6 939 aaKnown RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 BTBD3Q9Y2F9 522 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 PLXNB3Q9ULL4 1909 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 LOC400499M0QZD8 3231 aa10.56□□□□□ -0.72
PTCD2P1-201ENST00000554393 A0A087X0T9 212 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 RCCD1A6NED2 376 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms