RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 PABPC5Q96DU9 382 aaKnown RBP12.35□□□□□ -0.43
LRP1-207ENST00000554174 IMP4Q96G21 291 aaKnown RBP12.35□□□□□ -0.43
LRP1-207ENST00000554174 FUBP3Q96I24 572 aaKnown RBP eCLIP12.35□□□□□ -0.43
LRP1-207ENST00000554174 ELMO2Q96JJ3 720 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 ZNF333Q96JL9 665 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 NDNQ99608 321 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 DRC3Q9H069 523 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
LRP1-207ENST00000554174 FAM96AQ9H5X1 160 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 ZDHHC2Q9UIJ5 367 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
LRP1-207ENST00000554174 F8W8V4 182 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 NEMP1O14524 444 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 CABYRO75952 493 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 PIGNO95427 931 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 MYL4P12829 197 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 STMN1P16949 149 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 EPHA3P29320 983 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 GCKP35557 465 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
LRP1-207ENST00000554174 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
LRP1-207ENST00000554174 UGP2Q16851 508 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 FAM171A1Q5VUB5 890 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 NEPROQ6NW34 567 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 FBXL22Q6P050 247 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 LRRC74BQ6ZQY2 392 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 RNF180Q86T96 592 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 PGBD5Q8N414 524 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
LRP1-207ENST00000554174 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 SGF29Q96ES7 293 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 ZYG11BQ9C0D3 744 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 FBXO44Q9H4M3 255 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 CYP4F11Q9HBI6 524 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
LRP1-207ENST00000554174 ATP13A1Q9HD20 1204 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
LRP1-207ENST00000554174 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 GRID2O43424 1007 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 PDE5AO76074 875 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 VNN2O95498 520 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 APOA4P06727 396 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 RHOQP17081 205 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TFEBP19484 476 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 ATP6V1C1P21283 382 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 GLDCP23378 1020 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 VHLP40337 213 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 RPL14P50914 215 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 RENBPP51606 427 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 KIAA0930Q6ICG6 404 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 OR13J1Q8NGT2 312 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 CFAP61Q8NHU2 1237 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 RDH11Q8TC12 318 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 SCG3Q8WXD2 468 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 FAM193BQ96PV7 902 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 MYCBPQ99417 103 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 OLFM1Q99784 485 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 NUF2Q9BZD4 464 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 UBE2OQ9C0C9 1292 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TMEM248Q9NWD8 314 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 ZNF212Q9UDV6 495 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 RAP2CQ9Y3L5 183 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 MTF2Q9Y483 593 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 IGLV3-10A0A075B6K4 115 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 NEMP2A6NFY4 417 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TMEM233B4DJY2 109 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 H2AFYO75367 372 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 SLC2A3P11169 496 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 ITGAXP20702 1163 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 YWHAQP27348 245 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 ETFBP38117 255 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 PBX3P40426 434 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 CD151P48509 253 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 NDST2P52849 883 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TAF10Q12962 218 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 KLF10Q13118 480 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 MUM1Q2TAK8 710 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 MARC1Q5VT66 337 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 ZNF354CQ86Y25 554 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 LRRC49Q8IUZ0 686 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 KBTBD2Q8IY47 623 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 TXNDC5Q8NBS9 432 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 HEXDCQ8WVB3 486 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 SREK1Q8WXA9 508 aaKnown RBP12.33□□□□□ -0.44
LRP1-207ENST00000554174 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 ANKRD27Q96NW4 1050 aa12.33□□□□□ -0.44
LRP1-207ENST00000554174 LENG8Q96PV6 779 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms