RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 ADH1BP00325 375 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 IL1BP01584 269 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 TNNT1P13805 278 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 VAV1P15498 845 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 COMTP21964 271 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 SLC8A1P32418 973 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 CST6Q15828 149 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 C22orf39Q6P5X5 142 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 Q6ZVU0 165 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 DAAM2Q86T65 1068 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 FAM71BQ8TC56 605 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 RHBDD1Q8TEB9 315 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 FAM129BQ96TA1 746 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 FCF1Q9Y324 198 aaKnown RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
XRCC3-206ENST00000554170 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
XRCC3-206ENST00000554170 ARID1BQ8NFD5 2236 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 A0A087WV48 116 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 A0A1B0GVT2 93 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 LRRD1A4D1F6 860 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 TRABD2BA6NFA1 517 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 EIF4E1BA6NMX2 242 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 KRT1P04264 644 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 CD48P09326 243 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 C5AR1P21730 350 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 KDELR1P24390 212 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 PSMD8P48556 350 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 ARSEP51690 589 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 AFF3P51826 1226 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SNRPD1P62314 119 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 CYP4F3Q08477 520 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 DPYSL3Q14195 570 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SUZ12Q15022 739 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 KIF19Q2TAC6 998 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 INO80DQ53TQ3 878 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 ANKRD20A8PQ5CZ79 823 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 CARD16Q5EG05 197 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 C11orf63Q6NUN7 778 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 LEKR1Q6ZMV7 388 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 USP30Q70CQ3 517 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 MARCH9Q86YJ5 346 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 TSC1Q92574 1164 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 ISG20Q96AZ6 181 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 OMDQ99983 421 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 TNKS2Q9H2K2 1166 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SP110Q9HB58 689 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 UBA2Q9UBT2 640 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 BTBD3Q9Y2F9 522 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
XRCC3-206ENST00000554170 HYOU1Q9Y4L1 999 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 SLCO1B1Q9Y6L6 691 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 PLXNA2O75051 1894 aa13.05□□□□□ -0.32
XRCC3-206ENST00000554170 KALRNO60229 2985 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 DOCK4Q8N1I0 1966 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 GOLGA8CPA6NN73 597 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 MID1O15344 667 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 TNFSF14O43557 240 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 RNASEH2AO75792 299 aaKnown RBP13.04□□□□□ -0.32
XRCC3-206ENST00000554170 CD160O95971 181 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 PRNPP04156 253 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 C7P10643 843 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 IL4RP24394 825 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 CHRNA3P32297 505 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 RHOAP61586 193 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 RAD51Q06609 339 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 IL10RBQ08334 325 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 CCDC15Q0P6D6 951 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 CAMK2BQ13554 666 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 VSIG1Q86XK7 387 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 LRRC8AQ8IWT6 810 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 ARHGAP12Q8IWW6 846 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 PLPP6Q8IY26 295 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 OR2A12Q8NGT7 310 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 PIP4K2CQ8TBX8 421 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.04□□□□□ -0.32
XRCC3-206ENST00000554170 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
XRCC3-206ENST00000554170 SNX19Q92543 992 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms