RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LPIN3Q9BQK8 851 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 PLAC1Q9HBJ0 212 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 EIF3KQ9UBQ5 218 aaKnown RBP9.65□□□□□ -0.86
SIX4-202ENST00000554079 PCDHGB3Q9Y5G1 929 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 MROH5Q6ZUA9 1318 aa9.65□□□□□ -0.86
SIX4-202ENST00000554079 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.65□□□□□ -0.87
SIX4-202ENST00000554079 NUP98P52948 1817 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 TAF1P21675 1872 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 E7ENX8 843 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 PLIN3O60664 434 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 XYLBO75191 536 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 RASAL1O95294 804 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 AMHP03971 560 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 CSH1P0DML2 217 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 CSH2P0DML3 217 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 UNGP13051 313 aaPredicted RBP9.65□□□□□ -0.87
SIX4-202ENST00000554079 CBLP22681 906 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 EEF1B2P24534 225 aaKnown RBP9.65□□□□□ -0.87
SIX4-202ENST00000554079 TALDO1P37837 337 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 CYP2J2P51589 502 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 ADARB1P78563 741 aaKnown RBP9.65□□□□□ -0.87
SIX4-202ENST00000554079 MPP1Q00013 466 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 ACAP2Q15057 778 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 KIZQ2M2Z5 673 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 LEXMQ3ZCV2 418 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 ATP13A4Q4VNC1 1196 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 LGSNQ5TDP6 509 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 TMEM236Q5W0B7 351 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 SPOCD1Q6ZMY3 1216 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 CDR2LQ86X02 465 aaPredicted RBP9.65□□□□□ -0.87
SIX4-202ENST00000554079 IFNL1Q8IU54 200 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 RCOR2Q8IZ40 523 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 LINC00518Q8N0U6 118 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 NDNFQ8TB73 568 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 DYNC2LI1Q8TCX1 351 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 CEP19Q96LK0 163 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 DACH2Q96NX9 599 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 BCL7BQ9BQE9 202 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 TTYH2Q9BSA4 534 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 DSN1Q9H410 356 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 TBC1D22BQ9NU19 505 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 PCDHB12Q9Y5F1 795 aa9.65□□□□□ -0.87
SIX4-202ENST00000554079 hCG_1818297A0A087WSY0 165 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 TCAF2A6NFQ2 919 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 PIK3R2O00459 728 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 EXTL3O43909 919 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 CD4P01730 458 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 CYP2A7P20853 494 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 ELK4P28324 431 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 FMO4P31512 558 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 EPHX2P34913 555 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 BCAMP50895 628 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 RPS6P62753 249 aaKnown RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 PPP3CAQ08209 521 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 INCA1Q0VD86 236 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 ART3Q13508 389 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 DGUOKQ16854 277 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 N4BP2L1Q5TBK1 243 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 TIFABQ6ZNK6 161 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 GDPD3Q7L5L3 318 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 C10orf107Q8IVU9 208 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 CCDC103Q8IW40 242 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 SLC22A15Q8IZD6 547 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 CNTD1Q8N815 330 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 FAM71DQ8N9W8 422 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 FAM83FQ8NEG4 500 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 URGCPQ8TCY9 931 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 GTF2H4Q92759 462 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 PPWD1Q96BP3 646 aaKnown RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 C1orf74Q96LT6 269 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 TWNKQ96RR1 684 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 C9orf16Q9BUW7 83 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 EFCAB1Q9HAE3 211 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 AGPAT3Q9NRZ7 376 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 TOPORSQ9NS56 1045 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 FBXL12Q9NXK8 326 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 ACTR3BQ9P1U1 418 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 RGS17Q9UGC6 210 aaPredicted RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 FBXO5Q9UKT4 447 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 AP4E1Q9UPM8 1137 aa9.64□□□□□ -0.87
SIX4-202ENST00000554079 ZFC3H1O60293 1989 aaKnown RBP9.64□□□□□ -0.87
SIX4-202ENST00000554079 SAGE2PA6NJ88 616 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 PDZK1P1A8MUH7 402 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TCP10L2B9ZVM9 353 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 PLK4O00444 970 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TBX1O43435 398 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 PI15O43692 258 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms