RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PLXNA2O75051 1894 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TYW5A2RUC4 315 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 EME2A4GXA9 379 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 C2CD4BA6NLJ0 364 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 MCF2LO15068 1137 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ALOX15BO15296 676 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ATP9BO43861 1147 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TCEA3O75764 348 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 GRAP2O75791 330 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 NDUFA10O95299 355 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TRUB2O95900 331 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 IGLV3-25P01717 112 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TMEM253P0C7T8 217 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SLC2A3P11169 496 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 VAV1P15498 845 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 PDGFRAP16234 1089 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TGM2P21980 687 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 MAT2AP31153 395 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SDC4P31431 198 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 FLT3P36888 993 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 NNMTP40261 264 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 PTPN9P43378 593 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 INHBCP55103 352 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TBX4P57082 545 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CNTN1Q12860 1018 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 EIF4EBP2Q13542 120 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CDH18Q13634 790 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SPA17Q15506 151 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SLC25A52Q3SY17 297 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 PPP1R15BQ5SWA1 713 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SYPL2Q5VXT5 272 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 DCUN1D2Q6PH85 259 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF574Q6ZN55 896 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ATG14Q6ZNE5 492 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 BNIPLQ7Z465 357 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 DSG4Q86SJ6 1040 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TAC4Q86UU9 113 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 DCP2Q8IU60 420 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TMEM139Q8IV31 216 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CCDC117Q8IWD4 279 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 APCDD1Q8J025 514 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TXLNBQ8N3L3 684 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CARNMT1Q8N4J0 409 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 IFI44Q8TCB0 444 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 MAPK15Q8TD08 544 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CTNNBL1Q8WYA6 563 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 RPL10LQ96L21 214 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CCNL2Q96S94 520 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 NPY6RQ99463 290 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 FAM117AQ9C073 453 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 THAP2Q9H0W7 228 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 METTL5Q9NRN9 209 aaKnown RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SPTLC3Q9NUV7 552 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 EVA1BQ9NVM1 165 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 NCKIPSDQ9NZQ3 722 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 UVRAGQ9P2Y5 699 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 SALL4Q9UJQ4 1053 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ACSL6Q9UKU0 697 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 ATXN7L1Q9ULK2 861 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TLR6Q9Y2C9 796 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 CA5BQ9Y2D0 317 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 PAXBP1Q9Y5B6 917 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 HS3ST3A1Q9Y663 406 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 EPN1Q9Y6I3 576 aaPredicted RBP7.89□□□□□ -1.15
ABCD4-220ENST00000553998 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
ABCD4-220ENST00000553998 TMEM191CA6NGB0 347 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 SOWAHDA6NJG2 315 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 FFAR2O15552 330 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 NOBOXO60393 691 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ENDOD1O94919 500 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 APOEP02649 317 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 SFTPCP11686 197 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 MYF5P13349 255 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 KRT10P13645 584 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 GPD1P21695 349 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 CCR1P32246 355 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RFC1P35251 1148 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 MAGEA1P43355 309 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 STK19P49842 368 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 SULT1E1P49888 294 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF143P52747 638 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RNASE9P60153 205 aaKnown RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 KRT83P78385 493 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 NFATC3Q12968 1075 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 TCEAL1Q15170 157 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF284Q2VY69 593 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 C3orf38Q5JPI3 329 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 BRMS1LQ5PSV4 323 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 PIP5KL1Q5T9C9 394 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RNF219Q5W0B1 726 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ZCCHC8Q6NZY4 707 aaKnown RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RAD9BQ6WBX8 426 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 STRADAQ7RTN6 431 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 HORMAD1Q86X24 394 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 LRRC8AQ8IWT6 810 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RHOT2Q8IXI1 618 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms