RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SLC5A3P53794 718 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 MAXP61244 160 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 NSUN2Q08J23 767 aaKnown RBP eCLIP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 HNRNPDQ14103 355 aaKnown RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 FAM171BQ6P995 826 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 TFAP2DQ7Z6R9 452 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 METTL23Q86XA0 190 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 CNTN4Q8IWV2 1026 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 RP9Q8TA86 221 aaKnown RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 MRGPRX2Q96LB1 330 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 IL12RB2Q99665 862 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 NPAS2Q99743 824 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 ACBD6Q9BR61 282 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 VCX3BQ9H321 246 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 COPG1Q9Y678 874 aaKnown RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 TTC24A2A3L6 582 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 CCL22O00626 93 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 MGEA5O60502 916 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 FESP07332 822 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 CD52P31358 61 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 CCR1P32246 355 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 GRIK1P39086 918 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 CD151P48509 253 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 SLC12A2P55011 1212 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 ART3Q13508 389 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 OVOS1Q6IE37 1185 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 C16orf89Q6UX73 402 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 C14orf80Q86SX3 495 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 APLFQ8IW19 511 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 KDM1BQ8NB78 822 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 MRPL46Q9H2W6 279 aaKnown RBP14.72□□□□□ -0.05
ACTN1-211ENST00000553882 ZBTB26Q9HCK0 441 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 ARHGEF38Q9NXL2 777 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 FBXO5Q9UKT4 447 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 TLL2Q9Y6L7 1015 aa14.72□□□□□ -0.05
ACTN1-211ENST00000553882 PSMD3O43242 534 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 CELF2O95319 508 aaKnown RBP14.71□□□□□ -0.05
ACTN1-211ENST00000553882 IGLV3-25P01717 112 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 KCNA5P22460 613 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 ALDH1A3P47895 512 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 PAPOLAP51003 745 aaKnown RBP14.71□□□□□ -0.05
ACTN1-211ENST00000553882 MS4A2Q01362 244 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 CEACAM7Q14002 265 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 SDHAF4Q5VUM1 108 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 FBXL19Q6PCT2 694 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 TRIM67Q6ZTA4 783 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 PQLC1Q8N2U9 271 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 SERPINI1Q99574 410 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 CATSPERBQ9H7T0 1116 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 WDR41Q9HAD4 459 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 ZDHHC7Q9NXF8 308 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 NCKIPSDQ9NZQ3 722 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 GIT1Q9Y2X7 761 aa14.71□□□□□ -0.05
ACTN1-211ENST00000553882 IQCA1LA6NCM1 817 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 RPL9P32969 192 aaKnown RBP14.71□□□□□ -0.06
ACTN1-211ENST00000553882 ADRA1AP35348 466 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 GEMP55040 296 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 ITKQ08881 620 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 PIGGQ5H8A4 983 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 NEPROQ6NW34 567 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 POTEHQ6S545 545 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 LDB1Q86U70 411 aaPredicted RBP14.71□□□□□ -0.06
ACTN1-211ENST00000553882 SNX31Q8N9S9 440 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 ICA1LQ8NDH6 482 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 BHLHE22Q8NFJ8 381 aaPredicted RBP14.71□□□□□ -0.06
ACTN1-211ENST00000553882 OLFM1Q99784 485 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 UBE2OQ9C0C9 1292 aaKnown RBP14.71□□□□□ -0.06
ACTN1-211ENST00000553882 SENP6Q9GZR1 1112 aaPredicted RBP14.71□□□□□ -0.06
ACTN1-211ENST00000553882 NMUR1Q9HB89 426 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 TNFRSF12AQ9NP84 129 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 VTI1BQ9UEU0 232 aa14.71□□□□□ -0.06
ACTN1-211ENST00000553882 E9PAM4 449 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 AHCYL1O43865 530 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 CPB1P15086 417 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 DNAJB2P25686 324 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 WNT3AP56704 352 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ZNF423Q2M1K9 1284 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 RASIP1Q5U651 963 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 SCN4BQ8IWT1 228 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 C2CD4AQ8NCU7 369 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 PHF21BQ96EK2 531 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 TRAPPC9Q96Q05 1148 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 HAPLN3Q96S86 360 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ZNF385DQ9H6B1 395 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ENTPD7Q9NQZ7 604 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 TREX1Q9NSU2 369 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 MTF2Q9Y483 593 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 DTNAQ9Y4J8 743 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 MT-CO1P00395 513 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 COL6A2P12110 1019 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 PAMP19021 973 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 FOLH1Q04609 750 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ZNF33AQ06730 810 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 EIF4EBP2Q13542 120 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 RANBP10Q6VN20 620 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 GK5Q6ZS86 529 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms