RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DFFAO00273 331 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 SLC9A3R1O14745 358 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 RAMP2O60895 175 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 CYBBP04839 570 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ARSAP15289 507 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 H2AFXP16104 143 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 CCNCP24863 283 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 OR1E1P30953 314 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 SLC6A4P31645 630 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ATXN3P54252 364 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 GPS1Q13098 491 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 RUNX3Q13761 415 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TRIP13Q15645 432 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ANO4Q32M45 955 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ALFQ53S48 1182 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 AFMIDQ63HM1 303 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 RFWD3Q6PCD5 774 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 CEP128Q6ZU80 1094 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TFAP2DQ7Z6R9 452 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 SYT12Q8IV01 421 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 CCDC13Q8IYE1 715 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TTC16Q8NEE8 873 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ANKRD7Q92527 254 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 CELF6Q96J87 481 aaKnown RBP14.73□□□□□ -0.05
SHMT2-208ENST00000553868 DCBLD2Q96PD2 775 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 KLC2Q9H0B6 622 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TSPYL1Q9H0U9 437 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 ARFGAP3Q9NP61 516 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 TRHDEQ9UKU6 1024 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 OBSL1O75147 1896 aa14.73□□□□□ -0.05
SHMT2-208ENST00000553868 A0A087WV48 116 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 A0A0A0MRY4 1105 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 GREM1O60565 184 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 OPHN1O60890 802 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 GCATO75600 419 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 CNTN5O94779 1100 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ITPKAP23677 461 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 RPL22P35268 128 aaKnown RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 RPL21P46778 160 aaKnown RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 CARSP49589 748 aaKnown RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 VPS41P49754 854 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 OXCT1P55809 520 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 USP4Q13107 963 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 POLD3Q15054 466 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 MPPE1Q53F39 396 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 MPP7Q5T2T1 576 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ARTNQ5T4W7 220 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 IZUMO3Q5VZ72 239 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 EMBQ6PCB8 327 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 SLC23A3Q6PIS1 610 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ZNF783Q6ZMS7 281 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ARHGEF18Q6ZSZ5 1173 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 SETD3Q86TU7 594 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 SLCO6A1Q86UG4 719 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 C11orf74Q86VG3 221 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ARHGAP12Q8IWW6 846 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 MINDY1Q8N5J2 469 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 MDGA1Q8NFP4 955 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 NSMCE1Q8WV22 266 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 USP13Q92995 863 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 FATE1Q969F0 183 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 WBP2Q969T9 261 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 P2RY11Q96G91 374 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 PRICKLE1Q96MT3 831 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 SPATA13Q96N96 652 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 LGMNQ99538 433 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 FAM83CQ9BQN1 747 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 FOXP3Q9BZS1 431 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 SLC39A8Q9C0K1 460 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 MAGEH1Q9H213 219 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 HAUS2Q9NVX0 235 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 ANAPC5Q9UJX4 755 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 PIEZO2Q9H5I5 2752 aa14.72□□□□□ -0.05
SHMT2-208ENST00000553868 GOLGA4Q13439 2230 aaKnown RBP14.72□□□□□ -0.05
SHMT2-208ENST00000553868 PCDH15Q96QU1 1955 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 RASA4BC9J798 803 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 RNF103O00237 685 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 DNALI1O14645 258 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-208ENST00000553868 RASA4O43374 803 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 TSPAN3O60637 253 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 TBL1XO60907 577 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 NEBLO76041 1014 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 SEC31AO94979 1220 aaKnown RBP14.71□□□□□ -0.05
SHMT2-208ENST00000553868 RHOCP08134 193 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 DRD1P21728 446 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 ITPKBP27987 946 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 GDF10P55107 478 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 ZXDBP98169 803 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 ITPRIPL1Q6GPH6 555 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 CFAP52Q8N1V2 620 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 ZNF557Q8N988 423 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-208ENST00000553868 RIN3Q8TB24 985 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 ART4Q93070 314 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 PPP1R2P1Q96PQ5 205 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 FMO2Q99518 471 aa14.71□□□□□ -0.05
SHMT2-208ENST00000553868 P2RY13Q9BPV8 354 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms