RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PLTPP55058 493 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 RPS14P62263 151 aaKnown RBP16.34■□□□□ 0.21
ACTN1-209ENST00000553659 TRADDQ15628 312 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 MPP7Q5T2T1 576 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 MBLAC2Q68D91 279 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ZDHHC24Q6UX98 284 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 SIX6OS1Q8N1H7 587 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 EMC1Q8N766 993 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 KCTD6Q8NC69 237 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 RAPGEF5Q92565 580 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 BIRC7Q96CA5 298 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 TXLNGYQ9BZA5 131 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 NEUROG2Q9H2A3 272 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 TM9SF3Q9HD45 589 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 CNGB3Q9NQW8 809 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 GOLGA6AQ9NYA3 693 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 TJP2Q9UDY2 1190 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 SUN2Q9UH99 717 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ACACAQ13085 2346 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 HMGB1P1B2RPK0 211 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 SMAPO00193 183 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 MSI1O43347 362 aaKnown RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 FBXO21O94952 628 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 DNTTP04053 509 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 NUDT17P0C025 328 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 POLR2EP19388 210 aaKnown RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 KCNJ1P48048 391 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 GRIA4P48058 902 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 RGS7P49802 495 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 PMS2P54278 862 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 TRMT10CQ7L0Y3 403 aaKnown RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 GSTA5Q7RTV2 222 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 HOOK3Q86VS8 718 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 FAM76AQ8TAV0 307 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 FBXO25Q8TCJ0 367 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 UBLCP1Q8WVY7 318 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 MAK16Q9BXY0 300 aaKnown RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 SGK2Q9HBY8 427 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 BTBD3Q9Y2F9 522 aa16.33■□□□□ 0.2
ACTN1-209ENST00000553659 URB1O60287 2271 aaKnown RBP16.33■□□□□ 0.2
ACTN1-209ENST00000553659 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 APOC4-APOC2K7ER74 178 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 TNFSF14O43557 240 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 PCDHGA12O60330 932 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ZNF189O75820 626 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ENDOD1O94919 500 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 FSBPO95073 299 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 IGLV3-27P01718 113 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 APOC2P02655 101 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 MYZAPP0CAP1 466 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 LCP1P13796 627 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 CD27P26842 260 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ADCY8P40145 1251 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 SGSHP51688 502 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 DAOAP59103 153 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 SNX1Q13596 522 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 KAZNQ674X7 775 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ANKRD11Q6UB99 2663 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 PCGF5Q86SE9 256 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 UNC45BQ8IWX7 931 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 GALNT15Q8N3T1 639 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ARFGAP1Q8N6T3 406 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ZNF557Q8N988 423 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 WFDC5Q8TCV5 224 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ATG4AQ8WYN0 398 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 AZIN2Q96A70 460 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 HERPUD2Q9BSE4 406 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 PABPC3Q9H361 631 aaKnown RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 DKK4Q9UBT3 224 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 ADAM21Q9UKJ8 722 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
ACTN1-209ENST00000553659 NEU2Q9Y3R4 380 aa16.32■□□□□ 0.2
ACTN1-209ENST00000553659 KNTC1P50748 2209 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 DSPP15924 2871 aaKnown RBP16.31■□□□□ 0.2
ACTN1-209ENST00000553659 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 GOLGA8CPA6NN73 597 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 IRAK2O43187 625 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 TBL1XO60907 577 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 GABBR2O75899 941 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 KRT14P02533 472 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 TCF4P15884 667 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ZFXP17010 805 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-209ENST00000553659 IL1R2P27930 398 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 CD70P32970 193 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 GRK6P43250 576 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 SLC11A2P49281 568 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 KRT81Q14533 505 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 CCDC14Q49A88 953 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms