RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 QKIQ96PU8 341 aaKnown RBP eCLIP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 NUDCD1Q96RS6 583 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 HERPUD2Q9BSE4 406 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 CPEB1Q9BZB8 566 aaKnown RBP14.02□□□□□ -0.17
TUBB3-202ENST00000553656 EPC1Q9H2F5 836 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 CD93Q9NPY3 652 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 RAPGEFL1Q9UHV5 662 aa14.02□□□□□ -0.17
TUBB3-202ENST00000553656 FAM47DPA6NHR8 397 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 MUSKO15146 869 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 INSIG1O15503 277 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 SEMA4FO95754 770 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 RBP3P10745 1247 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 BCKDHBP21953 392 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 CA4P22748 312 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 XPAP23025 273 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 CES1P23141 567 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 CXCR5P32302 372 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 NBL1P41271 181 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 CNTN1Q12860 1018 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 DARS2Q6PI48 645 aaKnown RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 B4GALNT4Q76KP1 1039 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 PGBD5Q8N414 524 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 FRMD1Q8N878 549 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 OR14C36Q8NHC7 312 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 PBKQ96KB5 322 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 ZNF641Q96N77 438 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 KLHL32Q96NJ5 620 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 VAT1Q99536 393 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 SEMA3CQ99985 751 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 GPR174Q9BXC1 333 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 HDAC8Q9BY41 377 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 FRMD8P1Q9BZ68 369 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 NEUROG2Q9H2A3 272 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 KCND1Q9NSA2 647 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 WSB2Q9NYS7 404 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 SERGEFQ9UGK8 458 aa14.01□□□□□ -0.17
TUBB3-202ENST00000553656 MBD1Q9UIS9 605 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 SMG5Q9UPR3 1016 aaKnown RBP14.01□□□□□ -0.17
TUBB3-202ENST00000553656 PLK4O00444 970 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 PIGNO95427 931 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 ATP1A1P05023 1023 aaKnown RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 HLA-DQB2P05538 268 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 DRD3P35462 400 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 METAP1P53582 386 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 NHLH1Q02575 133 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 ZBTB17Q13105 803 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 KLF1Q13351 362 aaPredicted RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 LPAL2Q16609 132 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 LONRF2Q1L5Z9 754 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 PLK5Q496M5 336 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 HS1BP3Q53T59 392 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 SPDYCQ5MJ68 293 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 NCEH1Q6PIU2 408 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 ADAT2Q7Z6V5 191 aaKnown RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14□□□□□ -0.17
TUBB3-202ENST00000553656 HTR3CQ8WXA8 447 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 FOXJ1Q92949 421 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 NKD2Q969F2 451 aaPredicted RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 ARRDC3Q96B67 414 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 ZC3H10Q96K80 434 aaKnown RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 IL12RB2Q99665 862 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 FAM118BQ9BPY3 351 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 CEP41Q9BYV8 373 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 PCED1AQ9H1Q7 454 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 SUV39H2Q9H5I1 410 aa14□□□□□ -0.17
TUBB3-202ENST00000553656 KLHL8Q9P2G9 620 aaPredicted RBP14□□□□□ -0.17
TUBB3-202ENST00000553656 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 A0A1W2PQ67 120 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 C16orf96A6NNT2 1141 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 MEI4A8MW99 385 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 RNF103O00237 685 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 NEMP1O14524 444 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 SOCS5O75159 536 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 FGGP02679 453 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 SERPINF2P08697 491 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ADRB3P13945 408 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 CR2P20023 1033 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 NFKBIAP25963 317 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PTPN3P26045 913 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ACSL1P33121 698 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 DHPSP49366 369 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ADPRHP54922 357 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 DSC2Q02487 901 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 TEX44Q53QW1 395 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 SYCP2LQ5T4T6 812 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PIP5KL1Q5T9C9 394 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 AGBL4Q5VU57 503 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 LYSMD4Q5XG99 296 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PMS2CLQ68D20 193 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PARS2Q7L3T8 475 aaKnown RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ARMCX6Q7L4S7 300 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 TTC7BQ86TV6 843 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 CAMK1DQ8IU85 385 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 TMEFF1Q8IYR6 380 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms