RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 GVINP1Q7Z2Y8 2422 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 KHNYNO15037 678 aaKnown RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 GJB3O75712 270 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 ZRANB2O95218 330 aaKnown RBP eCLIP23.11■■□□□ 1.29
TDP1-206ENST00000553569 IGHV4-34P06331 123 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 ADRB3P13945 408 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 ZFXP17010 805 aaPredicted RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 MX2P20592 715 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 HOXD12P35452 270 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 TAS2R38P59533 333 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 CCDC15Q0P6D6 951 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 AASDHQ4L235 1098 aaPredicted RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 TRIM61Q5EBN2 209 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 PEAR1Q5VY43 1037 aaPredicted RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 FBXL19Q6PCT2 694 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 SRLQ86TD4 932 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 LRRC49Q8IUZ0 686 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 RCOR2Q8IZ40 523 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 BBS5Q8N3I7 341 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 DNASE2BQ8WZ79 361 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 ANP32BQ92688 251 aaKnown RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 VOPP1Q96AW1 172 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 RBM41Q96IZ5 413 aaKnown RBP23.11■■□□□ 1.29
TDP1-206ENST00000553569 GUCA1BQ9UMX6 200 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 CAPN6Q9Y6Q1 641 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 PI4KAP42356 2102 aa23.11■■□□□ 1.29
TDP1-206ENST00000553569 C16orf96A6NNT2 1141 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 FTCDO95954 541 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 CCDC175P0C221 793 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 GNSP15586 552 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 CTNNA2P26232 953 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 MMP13P45452 471 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 RENBPP51606 427 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 DUOXA1Q1HG43 343 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 MARC1Q5VT66 337 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 TIGD7Q6NT04 549 aaPredicted RBP23.1■■□□□ 1.29
TDP1-206ENST00000553569 PEX26Q7Z412 305 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 SYCE1Q8N0S2 351 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 CCNYQ8ND76 341 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 EXD1Q8NHP7 514 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 PSKH2Q96QS6 385 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 SUSD2Q9UGT4 822 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 AMFRQ9UKV5 643 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 PCDHA3Q9Y5H8 950 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 PLXNA2O75051 1894 aa23.1■■□□□ 1.29
TDP1-206ENST00000553569 hCG_1818297A0A087WSY0 165 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 TTC24A2A3L6 582 aaPredicted RBP23.09■■□□□ 1.29
TDP1-206ENST00000553569 KRT86O43790 486 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 CST8O60676 142 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 MAT2AP31153 395 aaKnown RBP23.09■■□□□ 1.29
TDP1-206ENST00000553569 SCNN1BP51168 640 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 MAXP61244 160 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 TFDP2Q14188 446 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 TAZQ16635 292 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 TFDP3Q5H9I0 405 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 LRRC73Q5JTD7 316 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 RABEPKQ7Z6M1 372 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 NT5DC3Q86UY8 548 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 PGBD5Q8N414 524 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 HDAC11Q96DB2 347 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 CPEB1Q9BZB8 566 aaKnown RBP23.09■■□□□ 1.29
TDP1-206ENST00000553569 KDM4CQ9H3R0 1056 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 PREBQ9HCU5 417 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 NT5MQ9NPB1 228 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 FSCN3Q9NQT6 498 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 PACSIN2Q9UNF0 486 aaPredicted RBP23.09■■□□□ 1.29
TDP1-206ENST00000553569 SLCO1B1Q9Y6L6 691 aa23.09■■□□□ 1.29
TDP1-206ENST00000553569 CCDC66A2RUB6 948 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 PCDH8O95206 1070 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 PTMAP06454 111 aaKnown RBP23.08■■□□□ 1.29
TDP1-206ENST00000553569 CCNCP24863 283 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CD27P26842 260 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 HSPA9P38646 679 aaKnown RBP23.08■■□□□ 1.29
TDP1-206ENST00000553569 ABL2P42684 1182 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CSNK1DP48730 415 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CCR5P51681 352 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 GRM3Q14832 879 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CFAP58Q5T655 872 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CAMK1DQ8IU85 385 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 CEP76Q8TAP6 659 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 TSGA13Q96PP4 275 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 TUBGCP5Q96RT8 1024 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 LGMNQ99538 433 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 MGME1Q9BQP7 344 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 NUSAP1Q9BXS6 441 aaKnown RBP23.08■■□□□ 1.29
TDP1-206ENST00000553569 ATP13A3Q9H7F0 1226 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 RXFP3Q9NSD7 469 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 ITM2BQ9Y287 266 aa23.08■■□□□ 1.29
TDP1-206ENST00000553569 ADAMTS9Q9P2N4 1935 aa23.08■■□□□ 1.28
TDP1-206ENST00000553569 FRYLO94915 3013 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 A0A1B0GTW7 788 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 LNP1A1A4G5 178 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 MATN3O15232 486 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 BCAT2O15382 392 aaPredicted RBP23.07■■□□□ 1.28
TDP1-206ENST00000553569 RNGTTO60942 597 aaKnown RBP23.07■■□□□ 1.28
TDP1-206ENST00000553569 NEBLO76041 1014 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 RWDD2BP57060 319 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 IRX4P78413 519 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 LMNB2Q03252 620 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 ADCY2Q08462 1091 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms