RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TBC1D3CQ6IPX1 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PMF1Q6P1K2 205 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 INO80CQ6PI98 192 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PRPF39Q86UA1 669 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 UNC45BQ8IWX7 931 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3Q8IZP1 549 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 APCDD1Q8J025 514 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 LSMEM2Q8N112 164 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SLC22A18ASQ8N1D0 253 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SIX6OS1Q8N1H7 587 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 CARNMT1Q8N4J0 409 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 CCDC150Q8NCX0 1101 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 FBXL13Q8NEE6 735 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 UBA3Q8TBC4 463 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 DQX1Q8TE96 717 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 IRGQQ8WZA9 623 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PAGE5Q96GU1 130 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PRR11Q96HE9 360 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 RPL10LQ96L21 214 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SPAG5Q96R06 1193 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 ZSWIM1Q9BR11 485 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 DPH1Q9BZG8 443 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 GPR27Q9NS67 375 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 RAB20Q9NX57 234 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 XPO7Q9UIA9 1087 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SARDHQ9UL12 918 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PCDHA7Q9UN72 937 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 UNC13CQ8NB66 2214 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 MYO9AB2RTY4 2548 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 TYW5A2RUC4 315 aaKnown RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PMS2P1A4D2B8 440 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CDRT15L2A8MXV6 281 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PRAMEF26H0Y7S4 382 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 FFAR2O15552 330 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 MAGEC1O60732 1142 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 LTFP02788 710 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 THEGLP0DJG4 465 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 MYF5P13349 255 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 KRT13P13646 458 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 LCP1P13796 627 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 MAP4P27816 1152 aaKnown RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PSMC2P35998 433 aaKnown RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 NUMBP49757 651 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 RGS7P49802 495 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 NOTCH2Q04721 2471 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CNTN1Q12860 1018 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CUL2Q13617 745 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 ISXQ2M1V0 245 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 LRRK1Q38SD2 2015 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CBWD6Q4V339 395 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 SETMARQ53H47 684 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CBWD3Q5JTY5 395 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CBWD5Q5RIA9 395 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PIP5KL1Q5T9C9 394 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CXorf57Q6NSI4 855 aaKnown RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 LCLAT1Q6UWP7 414 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 GCNT7Q6ZNI0 430 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 TAC4Q86UU9 113 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CEP57L1Q8IYX8 460 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 CFAP52Q8N1V2 620 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 SLC35F5Q8WV83 523 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 TFAP2BQ92481 460 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 APOLD1Q96LR9 279 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 ZNF396Q96N95 335 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-219ENST00000553488 SERPINB11Q96P15 392 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 PREBQ9HCU5 417 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 ZFP64Q9NPA5 681 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 THSD1Q9NS62 852 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 KLHL11Q9NVR0 708 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 NLGN3Q9NZ94 848 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 HESX1Q9UBX0 185 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 SATB2Q9UPW6 733 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 TLR6Q9Y2C9 796 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 COQ4Q9Y3A0 265 aa7.48□□□□□ -1.21
ATXN3-219ENST00000553488 ALOX15BO15296 676 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 RNGTTO60942 597 aaKnown RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 RHOBTB3O94955 611 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 MOCS3O95396 460 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 MOCS2O96007 188 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 IGLV3-25P01717 112 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 MYL1P05976 194 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 VDRP11473 427 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CD19P15391 556 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PRLRP16471 622 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 TGM2P21980 687 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 ME1P48163 572 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CD97P48960 835 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 RPL34P49207 117 aaKnown RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 CSRP3P50461 194 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PDX1P52945 283 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 PLK1P53350 603 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 EIF4EBP2Q13542 120 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-219ENST00000553488 STAT4Q14765 748 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 POM121L1PQ3SYA9 428 aa7.47□□□□□ -1.21
ATXN3-219ENST00000553488 C3orf38Q5JPI3 329 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms