RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 SLC35G2Q8TBE7 412 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 PPP1R16AQ96I34 528 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 SERAC1Q96JX3 654 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 CCDC42Q96M95 316 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 GDAP1L1Q96MZ0 367 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 OSBPL1AQ9BXW6 950 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 GPR27Q9NS67 375 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 DKK3Q9UBP4 350 aa19.55■□□□□ 0.72
PTCH1-227ENST00000553256 CEP295Q9C0D2 2601 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 KCNK3O14649 394 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 MAFKO60675 156 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 UGT2B4P06133 528 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 MAT2AP31153 395 aaKnown RBP19.54■□□□□ 0.72
PTCH1-227ENST00000553256 NXPH1P58417 271 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 RHOAP61586 193 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 MMRN1Q13201 1228 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 TEAD4Q15561 434 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 SEL1L3Q68CR1 1132 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 PRPF39Q86UA1 669 aaKnown RBP19.54■□□□□ 0.72
PTCH1-227ENST00000553256 IQCHQ86VS3 1027 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 MFSD2AQ8NA29 543 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 TSEN2Q8NCE0 465 aaKnown RBP19.54■□□□□ 0.72
PTCH1-227ENST00000553256 PCDH19Q8TAB3 1148 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 KLHL32Q96NJ5 620 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 KLF6Q99612 283 aaPredicted RBP19.54■□□□□ 0.72
PTCH1-227ENST00000553256 IPO11Q9UI26 975 aaKnown RBP19.54■□□□□ 0.72
PTCH1-227ENST00000553256 GGT7Q9UJ14 662 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 INTUQ9ULD6 942 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 ASPMQ8IZT6 3477 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 TMEM131Q92545 1883 aa19.54■□□□□ 0.72
PTCH1-227ENST00000553256 KRIT1O00522 736 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 SH3BP5O60239 455 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 PCDHGA12O60330 932 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 CER1O95813 267 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 TPM1P09493 284 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 TIMP2P16035 220 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 CR2P20023 1033 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 ARL4AP40617 200 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 CCDC15Q0P6D6 951 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 GDPD4Q6W3E5 623 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 ZSWIM9Q86XI8 627 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 PQLC3Q8N755 202 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 HCAR2Q8TDS4 363 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 RAB7BQ96AH8 199 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 EXOC2Q96KP1 924 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 CAMK1GQ96NX5 476 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 PSKH2Q96QS6 385 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 C1QTNF2Q9BXJ5 285 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 DEF6Q9H4E7 631 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 TM7SF3Q9NS93 570 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 LCMT1Q9UIC8 334 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 CA5BQ9Y2D0 317 aa19.53■□□□□ 0.72
PTCH1-227ENST00000553256 A0A1B0GTQ1 180 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.72
PTCH1-227ENST00000553256 PRAMEF26H0Y7S4 382 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 TLR4O00206 839 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 DAPK3O43293 454 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 IGSF6O95976 241 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 CDH6P55285 790 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 NSUN2Q08J23 767 aaKnown RBP eCLIP19.52■□□□□ 0.72
PTCH1-227ENST00000553256 SLC10A7Q0GE19 358 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 RFTN1Q14699 578 aaPredicted RBP19.52■□□□□ 0.72
PTCH1-227ENST00000553256 PAFAH1B3Q15102 231 aaKnown RBP19.52■□□□□ 0.72
PTCH1-227ENST00000553256 SETMARQ53H47 684 aaPredicted RBP19.52■□□□□ 0.72
PTCH1-227ENST00000553256 NCBP2-AS2Q69YL0 99 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 GCNT7Q6ZNI0 430 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 KANSL1Q7Z3B3 1105 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ABI3BPQ7Z7G0 1075 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ASB12Q8WXK4 309 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 RFFLQ8WZ73 363 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 SPOCK2Q92563 424 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ECHDC3Q96DC8 303 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ZNF599Q96NL3 588 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ZNF670Q9BS34 389 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ERVMER34-1Q9H9K5 563 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 DYRK4Q9NR20 520 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 PCOLCE2Q9UKZ9 415 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 ITM2BQ9Y287 266 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 CHD8Q9HCK8 2581 aa19.52■□□□□ 0.72
PTCH1-227ENST00000553256 DFFAO00273 331 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 TRAFD1O14545 582 aaPredicted RBP19.51■□□□□ 0.71
PTCH1-227ENST00000553256 RAD51BO15315 384 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 PIGNO95427 931 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 PRLRP16471 622 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 ITIH2P19823 946 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 ARHGAP25P42331 645 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 RXRGP48443 463 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 HADHBP55084 474 aaKnown RBP19.51■□□□□ 0.71
PTCH1-227ENST00000553256 OVGP1Q12889 678 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 HADHQ16836 314 aaKnown RBP19.51■□□□□ 0.71
PTCH1-227ENST00000553256 TSR1Q2NL82 804 aaKnown RBP19.51■□□□□ 0.71
PTCH1-227ENST00000553256 KIAA1161Q6NSJ0 714 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 FBXL19Q6PCT2 694 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 TMCO3Q6UWJ1 677 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 GLRX5Q86SX6 157 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 ZNF354CQ86Y25 554 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 NAXDQ8IW45 347 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 RHOT2Q8IXI1 618 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 PGBD5Q8N414 524 aa19.51■□□□□ 0.71
PTCH1-227ENST00000553256 RAPGEF5Q92565 580 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms