RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 LMLNQ96KR4 655 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 SMC6Q96SB8 1091 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 PIDD1Q9HB75 910 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 TCAF1Q9Y4C2 921 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 PSAT1Q9Y617 370 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 ATG2AQ2TAZ0 1938 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 EPOP01588 193 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 SERPINF2P08697 491 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 LMAN2Q12907 356 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 NAB1Q13506 487 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 SIRPB2Q5JXA9 342 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 FEM1CQ96JP0 617 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 EXOC2Q96KP1 924 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 MRM3Q9HC36 420 aaKnown RBP19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 INTS9Q9NV88 658 aaKnown RBP19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 PRKAG3Q9UGI9 489 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 PRPF4O43172 522 aaKnown RBP eCLIP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 TYROBPO43914 113 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 KRT37O76014 449 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 CYBBP04839 570 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 SNRPAP09012 282 aaKnown RBP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 ADRA1DP25100 572 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 SERPINH1P50454 418 aaKnown RBP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 CDK18Q07002 472 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 SMAD1Q15797 465 aaKnown RBP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 TRIB3Q96RU7 358 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 LINC00597Q9H2U6 94 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 SSU72Q9NP77 194 aaKnown RBP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 KIAA1522Q9P206 1035 aaPredicted RBP19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 ZFATQ9P243 1243 aa19.77■□□□□ 0.76
RBFOX1-215ENST00000553186 CCDC78A2IDD5 438 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 RFXAPO00287 272 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 INSIG1O15503 277 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 SPAG7O75391 227 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 MT-CO1P00395 513 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 PENKP01210 267 aaPredicted RBP19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 CD70P32970 193 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 SCNN1BP51168 640 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 SLC18A1P54219 525 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 ARMC3Q5W041 872 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 PACS1Q6VY07 963 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 RASSF3Q86WH2 238 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 PPHLN1Q8NEY8 458 aaKnown RBP19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 C2orf49Q9BVC5 232 aaPredicted RBP19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 SFXN1Q9H9B4 322 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 TREX1Q9NSU2 369 aa19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 INTS6Q9UL03 887 aaKnown RBP19.77■□□□□ 0.75
RBFOX1-215ENST00000553186 FAM47DPA6NHR8 397 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 TRIM49D1C9J1S8 452 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 MT-ND3P03897 115 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 CES1P23141 567 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 SERPINB9P50453 376 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 TEDDM1Q5T9Z0 273 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 LGSNQ5TDP6 509 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 RNF135Q8IUD6 432 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 ACDQ96AP0 544 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 LRRC3BQ96PB8 259 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 NUDCD1Q96RS6 583 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 RANBP9Q96S59 729 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 LHX3Q9UBR4 397 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 SMG5Q9UPR3 1016 aaKnown RBP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 KRT38O76015 456 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 HLA-DPA1P20036 260 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 ARNTP27540 789 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 PLK1P53350 603 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 NSUN2Q08J23 767 aaKnown RBP eCLIP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 BMPR2Q13873 1038 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 PLEKHG6Q3KR16 790 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 HSP90AA5PQ58FG0 334 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 ESRP1Q6NXG1 681 aaKnown RBP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 KCNMB4Q86W47 210 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 ANKRD42Q8N9B4 389 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 DENND1AQ8TEH3 1009 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 IRF7Q92985 503 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 ATP2A3Q93084 1043 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 AGAP2Q99490 1192 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 KLF6Q99612 283 aaPredicted RBP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 CDCA3Q99618 268 aaPredicted RBP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 C20orf96Q9NUD7 363 aaPredicted RBP19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 TBC1D14Q9P2M4 693 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 SLC2A6Q9UGQ3 507 aa19.76■□□□□ 0.75
RBFOX1-215ENST00000553186 GOLGA8RI6L899 631 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 HLA-FP30511 346 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 ARCN1P48444 511 aaKnown RBP19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 SLC18A2Q05940 514 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 LRRC14Q15048 493 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 ADGRG2Q8IZP9 1017 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 BANPQ8N9N5 519 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 MRPL38Q96DV4 380 aaKnown RBP19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 MTBPQ96DY7 904 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 IFT43Q96FT9 208 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 SCUBE2Q9NQ36 999 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 SPHK2Q9NRA0 654 aa19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 FCF1Q9Y324 198 aaKnown RBP19.75■□□□□ 0.75
RBFOX1-215ENST00000553186 REV3LO60673 3130 aa19.74■□□□□ 0.75
RBFOX1-215ENST00000553186 HEATR9A2RTY3 570 aa19.74■□□□□ 0.75
RBFOX1-215ENST00000553186 K7ERQ8 282 aa19.74■□□□□ 0.75
RBFOX1-215ENST00000553186 RFPL1O75677 317 aa19.74■□□□□ 0.75
RBFOX1-215ENST00000553186 CNTFP26441 200 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms