RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 NOTUMQ6P988 496 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 DHRS4L2Q6PKH6 230 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SNX32Q86XE0 403 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 FAM20CQ8IXL6 584 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TRIML2Q8N7C3 387 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CNTD1Q8N815 330 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 TSPAN14Q8NG11 270 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CEP70Q8NHQ1 597 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 RIN3Q8TB24 985 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SLC35F5Q8WV83 523 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 WNT8BQ93098 351 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 DNAJC1Q96KC8 554 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 SPATA13Q96N96 652 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CDRT15Q96T59 188 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SNRNP25Q9BV90 132 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 SLC4A5Q9BY07 1137 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 EFCAB1Q9HAE3 211 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 PLEKHA5Q9HAU0 1116 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 DDX18Q9NVP1 670 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 GPATCH2LQ9NWQ4 482 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CACNG4Q9UBN1 327 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 APPL1Q9UKG1 709 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 RAP2CQ9Y3L5 183 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CEPT1Q9Y6K0 416 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 MYO16Q9Y6X6 1858 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 THSD7BQ9C0I4 1608 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SHROOM3Q8TF72 1996 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CASP8AP2Q9UKL3 1982 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 HDAC3O15379 428 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TOP3BO95985 862 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 PRKCGP05129 697 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 COL6A1P12109 1028 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TKTP29401 623 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 HOXC13P31276 330 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 ART3Q13508 389 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 DPYSL2Q16555 572 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CDO1Q16878 200 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 XKR4Q5GH76 650 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 SEL1L3Q68CR1 1132 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 IYDQ6PHW0 289 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 LIMS2Q7Z4I7 341 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 ZDHHC17Q8IUH5 632 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 BHLHE22Q8NFJ8 381 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 HM13Q8TCT9 377 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TBC1D20Q96BZ9 403 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TSNARE1Q96NA8 513 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 C11orf84Q9BUA3 381 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 B3GNT4Q9C0J1 378 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 COPS7BQ9H9Q2 264 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 PLGRKTQ9HBL7 147 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 SNX15Q9NRS6 342 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 WDR70Q9NW82 654 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 KCTD5Q9NXV2 234 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 RIMKLBQ9ULI2 386 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 FAF1Q9UNN5 650 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 PIN4Q9Y237 131 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 MYO18AQ92614 2054 aaKnown RBP7.43□□□□□ -1.22
BEST3-212ENST00000553096 SMIM28A0A1B0GU29 152 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ZNF701M0R085 212 aaPredicted RBP7.43□□□□□ -1.22
BEST3-212ENST00000553096 TRIM38O00635 465 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ZMPSTE24O75844 475 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 PAHP00439 452 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 MYL3P08590 195 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 CES1P23141 567 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 SLC5A2P31639 672 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 CENPAP49450 140 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ACADVLP49748 655 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 THOP1P52888 689 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 LIMK2P53671 638 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 SREBF2Q12772 1141 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 SLC9B1Q4ZJI4 515 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 C17orf99Q6UX52 265 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 IFNL1Q8IU54 200 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 SCUBE3Q8IX30 993 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 UNC5BQ8IZJ1 945 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ZNF781Q8N8C0 355 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 FNDC8Q8TC99 324 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 HTR3CQ8WXA8 447 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 WDR41Q9HAD4 459 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 VPS45Q9NRW7 570 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 PNPLA3Q9NST1 481 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ZNHIT2Q9UHR6 403 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 ANKRD6Q9Y2G4 727 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 MYLKQ15746 1914 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 MANSC4A6NHS7 340 aaPredicted RBP7.43□□□□□ -1.22
BEST3-212ENST00000553096 MATN2O00339 956 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 PTGESO14684 152 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 HNRNPCP07910 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
BEST3-212ENST00000553096 XRCC1P18887 633 aaPredicted RBP7.43□□□□□ -1.22
BEST3-212ENST00000553096 CYP2B6P20813 491 aa7.43□□□□□ -1.22
BEST3-212ENST00000553096 DNAJB1P25685 340 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms