RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NOC3LQ8WTT2 800 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PDCD6IPQ8WUM4 868 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 OR8D1Q8WZ84 308 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 GAL3ST3Q96A11 431 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SYAP1Q96A49 352 aaPredicted RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 FAM131CQ96AQ9 280 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PPP1R13BQ96KQ4 1090 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SMOQ99835 787 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CPEB1Q9BZB8 566 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 UNKQ9C0B0 810 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 DPEP3Q9H4B8 488 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 KIAA1586Q9HCI6 787 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CYP4F12Q9HCS2 524 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PNPLA8Q9NP80 782 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SLAMF7Q9NQ25 335 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 DYRK4Q9NR20 520 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 KRT82Q9NSB4 513 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 OLA1Q9NTK5 396 aaKnown RBP5.3□□□□□ -1.56
CKAP4-203ENST00000553039 PDRG1Q9NUG6 133 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 OSER1Q9NX31 292 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 STOML2Q9UJZ1 356 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 DYRK1BQ9Y463 629 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 KIF3AQ9Y496 699 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 HIVEP1P15822 2718 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 CELSR2Q9HCU4 2923 aa5.3□□□□□ -1.56
CKAP4-203ENST00000553039 MED13LQ71F56 2210 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CCDC168Q8NDH2 2452 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 VWA3AA6NCI4 1184 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 FPGTO14772 594 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 HGSO14964 777 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 MCF2LO15068 1137 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 STX6O43752 255 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RAD1O60671 282 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TBL1XO60907 577 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RFPL1O75677 317 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 NADKO95544 446 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 BPNT1O95861 308 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CST3P01034 146 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ALPIP09923 528 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 P4HA1P13674 534 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CTSEP14091 401 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CD1EP15812 388 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PRLRP16471 622 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 HOXB4P17483 251 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TNNI1P19237 187 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CD70P32970 193 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 DRD3P35462 400 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 SOX5P35711 763 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PRPHP41219 470 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 SLC11A2P49281 568 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 KIF11P52732 1056 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 THOP1P52888 689 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CLDN2P57739 230 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RPS21P63220 83 aaKnown RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CDC20Q12834 499 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CNTN1Q12860 1018 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PDE1CQ14123 709 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF284Q2VY69 593 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ACCSLQ4AC99 568 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PRRT3Q5FWE3 981 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 DCAF12Q5T6F0 453 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 HGSNATQ68CP4 663 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 FIGNL1Q6PIW4 674 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CCDC186Q7Z3E2 898 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RD3Q7Z3Z2 195 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PTAR1Q7Z6K3 402 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ZSCAN30Q86W11 494 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 GPBP1Q86WP2 473 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 WDR49Q8IV35 697 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 MFN1Q8IWA4 741 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 FUKQ8N0W3 1084 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 GPD1LQ8N335 351 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 ARL10Q8N8L6 244 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 Q8N9G6 341 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 SLC2A14Q8TDB8 520 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 RNF139Q8WU17 664 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 KLK6Q92876 244 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 SAAL1Q96ER3 474 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 CALML4Q96GE6 196 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TCTN2Q96GX1 697 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 MRGPRX3Q96LB0 322 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 BMFQ96LC9 184 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 LURAP1Q96LR2 239 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TEFMQ96QE5 360 aaKnown RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PLIN2Q99541 437 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 MYOCQ99972 504 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 REEP2Q9BRK0 252 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 SLC17A9Q9BYT1 436 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TM6SF1Q9BZW5 370 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 FOXP1Q9H334 677 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 NMUR1Q9HB89 426 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 PFDN2Q9UHV9 154 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
CKAP4-203ENST00000553039 MCM8Q9UJA3 840 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 APPL1Q9UKG1 709 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 TLK1Q9UKI8 766 aa5.29□□□□□ -1.56
CKAP4-203ENST00000553039 POLR3KQ9Y2Y1 108 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms