RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PARGQ86W56 976 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 OR7D4Q8NG98 312 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 VOPP1Q96AW1 172 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 ISG20Q96AZ6 181 aaKnown RBP12.06□□□□□ -0.48
CKAP4-202ENST00000552828 C18orf8Q96DM3 657 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 IQCDQ96DY2 449 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 TBCBQ99426 244 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 KLF6Q99612 283 aaPredicted RBP12.06□□□□□ -0.48
CKAP4-202ENST00000552828 HEPHQ9BQS7 1158 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 XPO4Q9C0E2 1151 aaKnown RBP12.06□□□□□ -0.48
CKAP4-202ENST00000552828 ABCG4Q9H172 646 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 TMPRSS4Q9NRS4 437 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 PPARGC1AQ9UBK2 798 aaKnown RBP12.06□□□□□ -0.48
CKAP4-202ENST00000552828 KLF15Q9UIH9 416 aa12.06□□□□□ -0.48
CKAP4-202ENST00000552828 NOCTQ9UK39 431 aaKnown RBP12.06□□□□□ -0.48
CKAP4-202ENST00000552828 TPP1O14773 563 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 TSPAN6O43657 245 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 NEBLO76041 1014 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 ENDOD1O94919 500 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 CD160O95971 181 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 MMEP08473 750 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 FLT3P36888 993 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 ARF5P84085 180 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 SKOR1P84550 965 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 RHDQ02161 417 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 GNA12Q03113 381 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 CFHR1Q03591 330 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 ISXQ2M1V0 245 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 TRIM72Q6ZMU5 477 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 ZNF605Q86T29 641 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 XYLT1Q86Y38 959 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 MSANTD4Q8NCY6 345 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 TPCN2Q8NHX9 752 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 IFI44Q8TCB0 444 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 MAPK15Q8TD08 544 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 SLC20A1Q8WUM9 679 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 RAB7BQ96AH8 199 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 SPON2Q9BUD6 331 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 ZYG11BQ9C0D3 744 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 SALL4Q9UJQ4 1053 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 TMEM59LQ9UK28 342 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 DOCK9Q9BZ29 2069 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 SHROOM3Q8TF72 1996 aa12.05□□□□□ -0.48
CKAP4-202ENST00000552828 A0A1W2PNU3 283 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 LRRC53A6NM62 1247 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 H3BM21 787 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 FPGTO14772 594 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 SPINT1O43278 529 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 AQP9O43315 295 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 SRGAP2O75044 1071 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 ZIC2O95409 532 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 CHRNB2P17787 502 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 TGM2P21980 687 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 CCNHP51946 323 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 PFN3P60673 137 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 FMO1Q01740 532 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 NRG1Q02297 640 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 SGCGQ13326 291 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 ASIC2Q16515 512 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 TPRG1LQ5T0D9 272 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 BROXQ5VW32 411 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 PARS2Q7L3T8 475 aaKnown RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 IRF2BP2Q7Z5L9 587 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 DENND6BQ8NEG7 585 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 SLC46A1Q96NT5 459 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 AGPAT1Q99943 283 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 BOCQ9BWV1 1114 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 TTYH3Q9C0H2 523 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 OSBPL2Q9H1P3 480 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 ATP13A1Q9HD20 1204 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 THSD1Q9NS62 852 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
CKAP4-202ENST00000552828 HECAQ9UBI9 543 aaPredicted RBP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
CKAP4-202ENST00000552828 IGLON5A6NGN9 336 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 C16orf96A6NNT2 1141 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 TCEA3O75764 348 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CYP1A1P04798 512 aaPredicted RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 ETFBP38117 255 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 NOMO3P69849 1222 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 EIF2B5Q13144 721 aaKnown RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CDKN3Q16667 212 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 ZNF805Q5CZA5 627 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 MANEALQ5VSG8 457 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CPA5Q8WXQ8 436 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 PRR11Q96HE9 360 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms